Integrative Orthology Viewer: LOC_Os03g38590 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g57220 LOC_Os02g47010 LOC_Os03g38590 ...8
Anchor pointLOC_Os07g37740 1
Best-Hits-and-Inparalogs(BHI)familyLOC_Os03g38590 1
Tree-based orthologLOC_Os03g38590 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0693G316 ATR0829G055 2
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0693G316 1
Tree-based ortholog1-to-1ATR0693G316 1
Ananas comosusOrthologous gene familymany-to-manyAco009144 Aco014389 Aco015986 ...4
Anchor point1-to-1Aco014389 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco009144 1
Tree-based ortholog1-to-1Aco009144 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G03550 AT1G11180 AT1G32050 ...5
Anchor point1-to-manyAT1G61250 AT1G11180 AT2G20840 3
Best-Hits-and-Inparalogs(BHI)family1-to-1AT2G20840 1
Tree-based ortholog1-to-manyAT1G11180 AT1G61250 AT2G20840 ...4
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g15486 Bradi1g15490 Bradi1g24610 ...8
Anchor point1-to-manyBradi2g51770 Bradi1g15486 Bradi1g24610 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi1g15490 1
Tree-based ortholog1-to-1Bradi1g15490 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre02.g089900 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre02.g089900 1
Tree-based ortholog1-to-1Cre02.g089900 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0139G0137 EGU1928G0020 EGU2211G1076 ...5
Anchor point1-to-1EGU2308G0012 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2308G0012 EGU2441G1979 2
Tree-based ortholog1-to-manyEGU2211G1076 EGU2441G1979 EGU2308G0012 3
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G1812 HVU0037G2645 HVU0037G3225 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0041G2094 1
Tree-based ortholog1-to-1HVU0041G2094 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0055s0011 Mapoly0237s0001 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0055s0011 1
Tree-based ortholog1-to-manyMapoly0237s0001 Mapoly0055s0011 2
Micromonas commodaOrthologous gene familymany-to-1MCO16G087 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G1461 MAC01G2527 MAC02G0034 ...8
Anchor point1-to-1MAC02G0034 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC09G3240 1
Tree-based ortholog1-to-manyMAC01G1461 MAC12G0425 MAC02G0034 ...4
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_03467 Oropetium_20150105_12718 Oropetium_20150105_16536 ...5
Anchor point1-to-manyOropetium_20150105_24545 Oropetium_20150105_16536 Oropetium_20150105_12718 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_16536 1
Tree-based ortholog1-to-1Oropetium_20150105_24545 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G41970 OB02G36110 OB03G33000 ...8
Anchor point1-to-manyOB07G24650 OB03G33000 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OB03G33000 1
Tree-based ortholog1-to-1OB03G33000 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0102099700.01 OsR498G0204593300.01 OsR498G0306453400.01 ...8
Anchor point1-to-manyOsR498G0714586200.01 OsR498G0102099700.01 OsR498G0306453400.01 3
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0306453400.01 1
Tree-based ortholog1-to-1OsR498G0306453400.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_07905 PEQU_11008 PEQU_26395 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-manyPEQU_26395 PEQU_11008 2
Tree-based ortholog1-to-manyPEQU_11008 PEQU_26395 PEQU_29993 3
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000109G1170 PH01000198G0020 PH01000363G0130 ...9
Anchor point1-to-1PH01000198G0020 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01001481G0370 1
Tree-based ortholog1-to-1PH01001481G0370 1
Physcomitrella patensOrthologous gene familymany-to-manyPp3c10_9510 Pp3c1_21730 Pp3c25_8700 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c5_14240 Pp3c10_9510 Pp3c25_8700 3
Tree-based ortholog1-to-manyPp3c25_8700 Pp3c5_14240 Pp3c10_9510 ...5
Picea abiesOrthologous gene familymany-to-manyPAB00021665 PAB00026530 PAB00027894 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00026530 1
Tree-based ortholog1-to-1PAB00026530 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G134100 Potri.003G099300 Potri.004G036600 ...7
Anchor point1-to-manyPotri.019G104000 Potri.004G036600 Potri.013G144700 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.019G104000 Potri.013G144700 2
Tree-based ortholog1-to-manyPotri.013G144700 Potri.019G104000 Potri.011G045100 ...5
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO117G0058 SMO361G0339 2
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO361G0339 1
Tree-based ortholog1-to-manySMO361G0339 SMO117G0058 2
Setaria italicaOrthologous gene familymany-to-manySeita.1G283700 Seita.2G354100 Seita.3G187600 ...8
Anchor point1-to-manySeita.2G354100 Seita.5G340200 Seita.9G179700 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.9G179800 1
Tree-based ortholog1-to-1Seita.9G179800 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc02g078840.2 Solyc07g054490.2 Solyc08g076210.2 ...6
Anchor point1-to-manySolyc07g054490.2 Solyc10g008550.2 Solyc02g078840.2 3
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc10g009180.2 Solyc02g078840.2 2
Tree-based ortholog1-to-manySolyc07g054490.2 Solyc12g010750.1 Solyc10g008550.2 ...5
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G180800 Sobic.001G180900 Sobic.002G340700 ...8
Anchor point1-to-manySobic.003G316850 Sobic.002G340700 Sobic.001G180800 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.001G180900 1
Tree-based ortholog1-to-1Sobic.001G180900 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0016700 Spipo14G0058200 Spipo8G0015700 3
Anchor point1-to-manySpipo8G0015700 Spipo14G0058200 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo14G0058200 1
Tree-based ortholog1-to-manySpipo14G0058200 Spipo8G0015700 2
Triticum aestivumOrthologous gene familymany-to-manyTAE01340G001 TAE02804G002 TAE11232G001 ...21
Best-Hits-and-Inparalogs(BHI)family1-to-1TAE26631G003 1
Tree-based ortholog1-to-manyTAE26631G003 TAE56031G002 2
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01005834001 GSVIVG01012985001 GSVIVG01030566001 3
Anchor point1-to-1GSVIVG01030566001 1
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01030566001 1
Tree-based ortholog1-to-manyGSVIVG01030566001 GSVIVG01005834001 2
Zea maysOrthologous gene familymany-to-manyZm00001d006605 Zm00001d010703 Zm00001d013787 ...11
Anchor point1-to-manyZm00001d006605 Zm00001d013787 Zm00001d021805 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d033090 1
Tree-based ortholog1-to-manyZm00001d013787 Zm00001d033090 2
Zostera marinaOrthologous gene familymany-to-manyZosma29g00300 Zosma311g00060 Zosma374g00080 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma374g00080 1
Tree-based ortholog1-to-manyZosma43g00850 Zosma29g00300 Zosma374g00080 3
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00001.1.g06630.1.sm.mkhc Zjn_sc00004.1.g08930.1.sm.mkhc Zjn_sc00007.1.g08080.1.sm.mkhc ...8
Anchor point1-to-manyZjn_sc00008.1.g10950.1.am.mkhc Zjn_sc00001.1.g06630.1.sm.mkhc Zjn_sc00019.1.g00420.1.sm.mkhc 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00004.1.g08930.1.sm.mkhc 1
Tree-based ortholog1-to-manyZjn_sc00022.1.g04420.1.sm.mkhc Zjn_sc00007.1.g08080.1.sm.mkhc Zjn_sc00004.1.g08930.1.sm.mkhc 3
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