Integrative Orthology Viewer: LOC_Os01g63160 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g03720 LOC_Os01g07430 LOC_Os01g07450 ...102
Best-Hits-and-Inparalogs(BHI)familyLOC_Os01g63160 1
Tree-based orthologLOC_Os01g63160 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0001G044 ATR0016G017 ATR0068G006 ...54
Anchor pointN/AATR0618G167 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0618G167 1
Tree-based ortholog1-to-manyATR0691G274 ATR0681G337 ATR0618G167 3
Ananas comosusOrthologous gene familymany-to-manyAco000514 Aco000590 Aco000847 ...95
Anchor pointN/AAco015411 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco015411 1
Tree-based ortholog1-to-manyAco006402 Aco031816 Aco003598 ...5
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G06180 AT1G08810 AT1G09540 ...118
Anchor pointN/AAT3G55730 AT2G39880 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyAT3G55730 AT2G39880 2
Tree-based ortholog1-to-manyAT5G67300 AT3G50060 AT2G23290 ...7
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g07260 Bradi1g10470 Bradi1g15581 ...101
Anchor pointN/ABradi2g55040 Bradi2g55303 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi2g55040 1
Tree-based ortholog1-to-1Bradi2g55040 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre03.g197100 Cre07.g345350 Cre09.g399067 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre09.g399067 1
Tree-based ortholog1-to-manyCre07.g345350 Cre14.g621050 Cre16.g677382 ...4
Elaeis guineensisOrthologous gene familymany-to-manyEGU0106G0001 EGU0139G0034 EGU0139G0106 ...140
Anchor pointN/AEGU2621G0627 EGU2211G0272 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2621G0627 EGU2211G0538 2
Tree-based ortholog1-to-manyEGU2211G0115 EGU0881G1303 EGU2121G0062 ...7
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0164 HVU0036G0216 HVU0036G0958 ...70
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0038G3484 1
Tree-based ortholog1-to-manyHVU0045G2956 HVU0045G0729 HVU0042G0033 ...6
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0006s0226 Mapoly0007s0271 Mapoly0008s0029 ...23
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0007s0271 1
Tree-based ortholog1-to-manyMapoly0032s0153 Mapoly0007s0271 2
Micromonas commodaOrthologous gene familymany-to-manyMCO05G655 MCO06G265 MCO08G241 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO05G655 1
Tree-based ortholog1-to-manyMCO10G086 MCO15G405 MCO01G123 ...4
Musa acuminataOrthologous gene familymany-to-manyMAC01G0074 MAC01G0491 MAC01G0617 ...259
Anchor pointN/AMAC04G3350 MAC05G3008 2
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC02G0058 1
Tree-based ortholog1-to-manyMAC09G2909 MAC04G3442 MAC09G1601 ...16
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00041 Oropetium_20150105_00632 Oropetium_20150105_01029 ...104
Anchor pointN/AOropetium_20150105_12796 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_12796 1
Tree-based ortholog1-to-1Oropetium_20150105_12796 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB0039G10010 OB01G11750 OB01G14210 ...95
Anchor pointN/AOB01G46120 OB01G46450 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G46120 1
Tree-based ortholog1-to-1OB01G46120 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100093200.01 OsR498G0100227600.01 OsR498G0100229500.01 ...98
Anchor pointN/AOsR498G0102339600.01 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0102339600.01 1
Tree-based ortholog1-to-1OsR498G0102339600.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_00368 PEQU_00728 PEQU_02109 ...101
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_32696 1
Tree-based ortholog1-to-manyPEQU_12592 PEQU_10550 PEQU_32696 3
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000005G1390 PH01000006G2680 PH01000008G0500 ...108
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01000043G2100 1
Tree-based ortholog1-to-manyPH01005460G0120 PH01000169G1060 PH01000043G2100 ...7
Physcomitrella patensOrthologous gene familymany-to-manyPp3c10_10240 Pp3c11_10350 Pp3c11_2650 ...39
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c5_2150 Pp3c6_24650 2
Tree-based ortholog1-to-manyPp3c3_12080 Pp3c23_7530 Pp3c20_8950 ...5
Picea abiesOrthologous gene familymany-to-manyPAB00000393 PAB00001541 PAB00001780 ...187
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00064942 PAB00060479 2
Tree-based ortholog1-to-manyPAB00020190 PAB00060479 PAB00032261 ...4
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G005100 Potri.001G036000 Potri.001G075400 ...178
Anchor pointN/APotri.010G195000 Potri.008G062700 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.010G195000 Potri.008G062700 2
Tree-based ortholog1-to-manyPotri.002G128900 Potri.014G035100 Potri.005G142600 ...12
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO115G0294 SMO118G0030 SMO143G0040 ...29
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO145G0069 1
Tree-based ortholog1-to-1SMO145G0069 1
Setaria italicaOrthologous gene familymany-to-manySeita.1G077900 Seita.1G209100 Seita.1G236400 ...113
Anchor pointN/ASeita.5G382600 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.5G382600 1
Tree-based ortholog1-to-1Seita.5G382600 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g005660.1 Solyc01g009070.2 Solyc01g009650.1 ...118
Anchor pointN/ASolyc09g011780.2 Solyc05g052850.2 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc09g011780.2 1
Tree-based ortholog1-to-manySolyc04g079360.1 Solyc12g019910.1 Solyc04g050000.1 ...7
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G056000 Sobic.001G075300 Sobic.001G110900 ...109
Anchor pointN/ASobic.003G357300 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.003G357300 1
Tree-based ortholog1-to-1Sobic.003G357300 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0049700 Spipo0G0050400 Spipo0G0100000 ...75
Anchor pointN/ASpipo6G0075400 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo0G0131000 1
Tree-based ortholog1-to-manySpipo6G0064700 Spipo6G0064900 Spipo5G0027100 ...7
Triticum aestivumOrthologous gene familymany-to-manyTAE00319G001 TAE00319G002 TAE00404G002 ...344
Anchor pointN/ATAE29845G003 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE44701G001 TAE30174G001 TAE29845G003 3
Tree-based ortholog1-to-manyTAE29845G003 TAE44701G001 TAE30174G001 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000232001 GSVIVG01000449001 GSVIVG01000460001 ...114
Anchor pointN/AGSVIVG01034041001 GSVIVG01016393001 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyGSVIVG01016393001 GSVIVG01034041001 2
Tree-based ortholog1-to-manyGSVIVG01009566001 GSVIVG01009424001 GSVIVG01034041001 ...4
Zea maysOrthologous gene familymany-to-manyZm00001d000361 Zm00001d002476 Zm00001d002482 ...159
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d012379 1
Tree-based ortholog1-to-1Zm00001d012379 1
Zostera marinaOrthologous gene familymany-to-manyZosma101g00340 Zosma107g00550 Zosma107g00630 ...90
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma239g00280 1
Tree-based ortholog1-to-manyZosma182g00270 Zosma101g00340 Zosma36g00250 ...4
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00001.1.g07040.1.am.mk Zjn_sc00001.1.g09400.1.sm.mk Zjn_sc00002.1.g00130.1.sm.mk ...153
Anchor pointN/AZjn_sc00040.1.g05390.1.sm.mk 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00040.1.g05390.1.sm.mk 1
Tree-based ortholog1-to-1Zjn_sc00040.1.g05390.1.sm.mk 1
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