Integrative Orthology Viewer: LOC_Os01g50460 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g12130 LOC_Os01g36070 LOC_Os01g40960 ...21
Best-Hits-and-Inparalogs(BHI)familyLOC_Os01g50460 1
Tree-based orthologLOC_Os01g50460 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0582G344 ATR0589G033 ATR0602G212 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0681G181 1
Tree-based ortholog1-to-1ATR0681G181 1
Ananas comosusOrthologous gene familymany-to-manyAco001900 Aco002476 Aco003627 ...16
Anchor pointN/AAco016508 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco011302 1
Tree-based ortholog1-to-1Aco016508 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G21460 AT1G66770 AT2G39060 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-1AT3G14770 1
Tree-based ortholog1-to-1AT3G14770 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g32920 Bradi1g62570 Bradi1g62890 ...17
Anchor pointN/ABradi2g47540 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi2g47540 1
Tree-based ortholog1-to-1Bradi2g47540 1
Chlamydomonas reinhardtiiOrthologous gene familymany-to-manyCre06.g271800 Cre06.g275000 Cre07.g340700 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre06.g271800 1
Tree-based ortholog1-to-manyCre07.g340700 Cre06.g271800 Cre06.g275000 3
Elaeis guineensisOrthologous gene familymany-to-manyEGU0849G0015 EGU0935G0853 EGU0935G0976 ...18
Anchor pointN/AEGU2441G2226 1
Best-Hits-and-Inparalogs(BHI)family1-to-1EGU2441G2226 1
Tree-based ortholog1-to-manyEGU0935G0976 EGU1136G0129 EGU2441G2226 3
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0492 HVU0036G0649 HVU0036G2104 ...16
Anchor pointN/AHVU0038G3287 1
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0038G3287 1
Tree-based ortholog1-to-1HVU0038G3287 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0003s0269 Mapoly0024s0143 Mapoly0030s0123 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0030s0123 1
Tree-based ortholog1-to-manyMapoly0030s0123 Mapoly1635s0001 Mapoly1225s0001 ...7
Micromonas commodaOrthologous gene familymany-to-1MCO07G451 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MCO07G451 1
Tree-based ortholog1-to-1MCO07G451 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G1890 MAC01G2328 MAC02G0096 ...26
Anchor pointN/AMAC11G2642 1
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC11G2642 1
Tree-based ortholog1-to-manyMAC11G1382 MAC11G2642 2
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_01286 Oropetium_20150105_01322 Oropetium_20150105_03237 ...22
Anchor pointN/AOropetium_20150105_11486 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_25048 1
Tree-based ortholog1-to-1Oropetium_20150105_25048 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G17700 OB01G22960 OB01G28510 ...19
Anchor pointN/AOB01G36910 1
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G36910 1
Tree-based ortholog1-to-1OB01G36910 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100435800.01 OsR498G0100787900.01 OsR498G0101225100.01 ...21
Anchor pointN/AOsR498G0510017200.01 OsR498G0101835100.01 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0101835100.01 1
Tree-based ortholog1-to-1OsR498G0101835100.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_02746 PEQU_02969 PEQU_03035 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_40374 1
Tree-based ortholog1-to-1PEQU_40374 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000003G4180 PH01000111G0470 PH01000117G0680 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01001393G0080 1
Tree-based ortholog1-to-1PH01002236G0120 1
Physcomitrella patensOrthologous gene familymany-to-manyPp3c10_2460 Pp3c10_2470 Pp3c11_2580 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c11_2580 Pp3c27_4170 Pp3c6_15559 3
Tree-based ortholog1-to-manyPp3c6_15559 Pp3c6_17210 Pp3c16_4240 ...4
Picea abiesOrthologous gene familymany-to-manyPAB00000539 PAB00001313 PAB00002967 ...63
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00057349 1
Tree-based ortholog1-to-1PAB00057349 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G060900 Potri.001G344300 Potri.001G355500 ...28
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.001G383000 1
Tree-based ortholog1-to-manyPotri.011G103600 Potri.001G383000 Potri.001G355500 3
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO116G0020 SMO116G0164 SMO116G0280 ...17
Best-Hits-and-Inparalogs(BHI)family1-to-manySMO143G0300 SMO274G0072 2
Tree-based ortholog1-to-manySMO116G0280 SMO116G0164 SMO116G0452 ...4
Setaria italicaOrthologous gene familymany-to-manySeita.1G135500 Seita.1G135600 Seita.1G135700 ...24
Anchor pointN/ASeita.5G284900 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.5G284900 1
Tree-based ortholog1-to-1Seita.5G284900 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g099870.1 Solyc01g099880.2 Solyc02g071520.2 ...31
Anchor pointN/ASolyc02g086920.1 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc02g071520.2 1
Tree-based ortholog1-to-manySolyc07g062120.2 Solyc02g071520.2 Solyc03g005880.2 3
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G373600 Sobic.001G377600 Sobic.002G259301 ...23
Anchor pointN/ASobic.003G269300 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.003G269300 1
Tree-based ortholog1-to-1Sobic.003G269300 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0014500 Spipo0G0112200 Spipo18G0015600 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo25G0000900 1
Tree-based ortholog1-to-1Spipo25G0000900 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00478G001 TAE00506G002 TAE00506G003 ...97
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE41797G003 TAE21055G002 2
Tree-based ortholog1-to-manyTAE21055G002 TAE41797G003 TAE52968G001 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000938001 GSVIVG01007777001 GSVIVG01007779001 ...16
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01021317001 1
Tree-based ortholog1-to-manyGSVIVG01014088001 GSVIVG01021317001 2
Zea maysOrthologous gene familymany-to-manyZm00001d000222 Zm00001d007365 Zm00001d009071 ...24
Anchor pointN/AZm00001d043735 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d043735 1
Tree-based ortholog1-to-1Zm00001d043735 1
Zostera marinaOrthologous gene familymany-to-manyZosma23g00230 Zosma34g00490 Zosma34g00500 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma70g00350 1
Tree-based ortholog1-to-1Zosma70g00350 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00002.1.g01590.1.am.mk Zjn_sc00002.1.g01810.1.am.mk Zjn_sc00002.1.g01820.1.sm.mkhc ...37
Anchor pointN/AZjn_sc00029.1.g03470.1.am.mkhc 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00073.1.g00150.1.sm.mkhc 1
Tree-based ortholog1-to-1Zjn_sc00073.1.g00150.1.sm.mkhc 1
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