Integrative Orthology Viewer: LOC_Os01g47740 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g47740 LOC_Os01g49770 LOC_Os02g05692 ...9
Anchor pointLOC_Os05g48970 1
Best-Hits-and-Inparalogs(BHI)familyLOC_Os01g47740 1
Tree-based orthologLOC_Os01g47740 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0030G001 ATR0580G371 ATR0602G043 ...5
Anchor point1-to-1ATR0602G043 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0602G043 1
Tree-based ortholog1-to-manyATR0759G092 ATR0580G371 ATR0800G045 ...5
Ananas comosusOrthologous gene familymany-to-manyAco006530 Aco006709 Aco006752 ...9
Anchor point1-to-1Aco006752 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco006752 1
Tree-based ortholog1-to-1Aco006752 1
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G17970 AT1G36950 AT1G45180 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-manyAT3G15070 AT1G53190 2
Tree-based ortholog1-to-manyAT1G53190 AT3G15070 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g33750 Bradi2g16490 Bradi2g17591 ...9
Anchor point1-to-manyBradi2g16490 Bradi2g46070 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi2g46070 1
Tree-based ortholog1-to-1Bradi2g46070 1
Chlamydomonas reinhardtiiBest-Hits-and-Inparalogs(BHI)family1-to-1Cre10.g442750 1
Tree-based ortholog1-to-1Cre10.g442750 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0223G0020 EGU0271G0001 EGU0827G0003 ...15
Anchor point1-to-manyEGU0935G0539 EGU2441G2208 EGU1138G0054 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2441G2208 EGU1876G0146 2
Tree-based ortholog1-to-manyEGU1876G0146 EGU2441G2208 2
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0433 HVU0036G1327 HVU0037G2672 ...8
Anchor point1-to-manyHVU0036G0433 HVU0038G2552 2
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0038G3548 1
Tree-based ortholog1-to-1HVU0036G0433 1
Marchantia polymorphaOrthologous gene familymany-to-1Mapoly0014s0075 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0014s0075 1
Tree-based ortholog1-to-1Mapoly0014s0075 1
Micromonas commodaBest-Hits-and-Inparalogs(BHI)family1-to-1MCO13G497 1
Tree-based ortholog1-to-1MCO13G497 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G0515 MAC01G2946 MAC02G1969 ...20
Best-Hits-and-Inparalogs(BHI)family1-to-manyMAC04G0159 MAC02G3020 2
Tree-based ortholog1-to-manyMAC10G0470 MAC05G0797 MAC07G0722 ...13
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_01608 Oropetium_20150105_01879 Oropetium_20150105_03883 ...8
Anchor point1-to-manyOropetium_20150105_03883 Oropetium_20150105_11662 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_11662 1
Tree-based ortholog1-to-1Oropetium_20150105_11662 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G35030 OB01G36490 OB02G13360 ...9
Anchor point1-to-manyOB05G33400 OB01G35030 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G35030 1
Tree-based ortholog1-to-1OB01G35030 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0101720400.01 OsR498G0101804400.01 OsR498G0202981900.01 ...9
Anchor point1-to-manyOsR498G0101720400.01 OsR498G0511348700.01 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0101720400.01 1
Tree-based ortholog1-to-1OsR498G0101720400.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_02717 PEQU_06476 PEQU_11955 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_32321 1
Tree-based ortholog1-to-1PEQU_32321 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000024G2290 PH01000046G0380 PH01000114G1080 ...15
Anchor point1-to-manyPH01000298G0450 PH01002164G0040 PH01000046G0380 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01002164G0040 PH01001699G0070 2
Tree-based ortholog1-to-manyPH01001699G0070 PH01002164G0040 2
Physcomitrella patensOrthologous gene familymany-to-manyPp3c19_21510 Pp3c22_1990 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c19_21510 Pp3c22_1990 2
Tree-based ortholog1-to-manyPp3c22_1990 Pp3c19_21510 2
Picea abiesOrthologous gene familymany-to-manyPAB00009728 PAB00018761 PAB00031616 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00009728 1
Tree-based ortholog1-to-manyPAB00063342 PAB00018761 PAB00031616 ...4
Populus trichocarpaOrthologous gene familymany-to-manyPotri.001G304900 Potri.001G373700 Potri.002G124300 ...13
Anchor point1-to-1Potri.001G373700 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyPotri.011G097100 Potri.001G373700 2
Tree-based ortholog1-to-manyPotri.001G373700 Potri.011G097100 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO119G0309 SMO329G0090 2
Anchor point1-to-1SMO329G0090 1
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO329G0090 1
Tree-based ortholog1-to-manySMO119G0309 SMO329G0090 2
Setaria italicaOrthologous gene familymany-to-manySeita.1G087400 Seita.3G146000 Seita.3G158100 ...9
Anchor point1-to-manySeita.5G263300 Seita.3G146000 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.5G263300 1
Tree-based ortholog1-to-1Seita.5G263300 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g107930.2 Solyc01g107940.2 Solyc03g118840.2 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc10g007140.2 Solyc12g014070.1 2
Tree-based ortholog1-to-manySolyc12g014070.1 Solyc10g007140.2 Solyc07g062720.1 3
Sorghum bicolorOrthologous gene familymany-to-manySobic.003G250400 Sobic.003G264901 Sobic.004G042100 ...9
Anchor point1-to-manySobic.009G232800 Sobic.003G250400 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.003G250400 1
Tree-based ortholog1-to-1Sobic.003G250400 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0151900 Spipo10G0043000 Spipo10G0044400 ...10
Anchor point1-to-1Spipo26G0022400 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo26G0022400 1
Tree-based ortholog1-to-1Spipo26G0022400 1
Triticum aestivumOrthologous gene familymany-to-manyTAE01398G005 TAE01987G002 TAE02401G001 ...24
Best-Hits-and-Inparalogs(BHI)family1-to-1TAE54301G003 1
Tree-based ortholog1-to-manyTAE31437G003 TAE08170G001 TAE54301G003 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01008343001 GSVIVG01009465001 GSVIVG01009466001 ...17
Anchor point1-to-1GSVIVG01014254001 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyGSVIVG01036994001 GSVIVG01014254001 2
Tree-based ortholog1-to-manyGSVIVG01014254001 GSVIVG01036994001 2
Zea maysOrthologous gene familymany-to-manyZm00001d002080 Zm00001d002416 Zm00001d009571 ...20
Anchor point1-to-manyZm00001d009571 Zm00001d011541 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d011541 1
Tree-based ortholog1-to-1Zm00001d011541 1
Zostera marinaOrthologous gene familymany-to-manyZosma111g00260 Zosma112g00460 Zosma142g00210 ...22
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma339g00060 1
Tree-based ortholog1-to-1Zosma339g00060 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00004.1.g09260.1.am.mkhc Zjn_sc00008.1.g01700.1.am.mkhc Zjn_sc00011.1.g00580.1.sm.mkhc ...16
Anchor point1-to-manyZjn_sc00147.1.g00410.1.am.mkhc Zjn_sc00029.1.g01480.1.sm.mkhc Zjn_sc00012.1.g01470.1.sm.mkhc 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00147.1.g00410.1.am.mkhc 1
Tree-based ortholog1-to-1Zjn_sc00147.1.g00410.1.am.mkhc 1
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