Integrative Orthology Viewer: LOC_Os01g14900 (Oryza sativa ssp. japonica) top


Inparalogs

Organism Source Genes #genes Details
Oryza sativa ssp. japonicaOrthologous gene familyLOC_Os01g14900 LOC_Os01g19390 LOC_Os01g22560 ...16
Anchor pointLOC_Os05g20100 1
Best-Hits-and-Inparalogs(BHI)familyLOC_Os01g14900 1
Tree-based orthologLOC_Os01g14900 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0001G051 ATR0130G001 ATR0559G050 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0693G219 1
Tree-based ortholog1-to-1ATR0693G219 1
Ananas comosusOrthologous gene familymany-to-manyAco002572 Aco005354 Aco009639 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manyAco031753 Aco002572 2
Tree-based ortholog1-to-manyAco013695 Aco013692 2
Arabidopsis thalianaOrthologous gene familymany-to-manyAT1G01610 AT1G02390 AT1G06520 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyAT4G01950 AT1G02390 2
Tree-based ortholog1-to-manyAT1G02390 AT4G01950 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g02805 Bradi1g09480 Bradi1g73935 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi2g33165 1
Tree-based ortholog1-to-1Bradi2g33165 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0159G0174 EGU0531G0561 EGU1107G0010 ...12
Anchor point1-to-1EGU2028G0354 1
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2621G1877 EGU2028G0354 2
Tree-based ortholog1-to-manyEGU1685G2258 EGU2211G0987 2
Hordeum vulgareOrthologous gene familymany-to-manyHVU0036G0626 HVU0036G2028 HVU0038G0543 ...12
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0281G0050 1
Tree-based ortholog1-to-1HVU0281G0050 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0044s0096 Mapoly0046s0032 Mapoly0074s0011 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0044s0096 1
Tree-based ortholog1-to-1Mapoly0044s0096 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G1228 MAC03G2225 MAC04G1581 ...15
Best-Hits-and-Inparalogs(BHI)family1-to-manyMAC07G0314 MAC04G1581 2
Tree-based ortholog1-to-manyMAC04G1581 MAC05G2991 MAC07G0314 ...4
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_00185 Oropetium_20150105_04896 Oropetium_20150105_05458 ...17
Anchor point1-to-1Oropetium_20150105_09753 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_09753 1
Tree-based ortholog1-to-1Oropetium_20150105_09753 1
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G19760 OB01G22260 OB01G23530 ...14
Anchor point1-to-manyOB01G19760 OB05G18410 2
Best-Hits-and-Inparalogs(BHI)family1-to-1OB01G19760 1
Tree-based ortholog1-to-1OB01G19760 1
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100737000.01 OsR498G0100836600.01 OsR498G0101593500.01 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0510274800.01 1
Tree-based ortholog1-to-1OsR498G0510274800.01 1
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_03325 PEQU_04356 PEQU_04970 ...14
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_25143 1
Tree-based ortholog1-to-1PEQU_04356 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000004G3640 PH01000019G1720 PH01000090G0720 ...15
Anchor point1-to-1PH01000632G0290 1
Best-Hits-and-Inparalogs(BHI)family1-to-1PH01000632G0290 1
Tree-based ortholog1-to-1PH01000632G0290 1
Physcomitrella patensOrthologous gene familymany-to-manyPp3c20_9340 Pp3c2_18040 Pp3c5_1510 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c6_29200 Pp3c2_18040 Pp3c5_1510 3
Tree-based ortholog1-to-manyPp3c5_1510 Pp3c6_29200 Pp3c2_18040 3
Picea abiesOrthologous gene familymany-to-manyPAB00005843 PAB00007526 PAB00008587 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-manyPAB00053776 PAB00029859 2
Tree-based ortholog1-to-1PAB00053776 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.002G192600 Potri.005G202200 Potri.006G097800 ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.002G192600 1
Tree-based ortholog1-to-1Potri.002G192600 1
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO118G0061 SMO118G0498 SMO118G0515 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO118G0498 1
Tree-based ortholog1-to-manySMO118G0498 SMO169G0102 SMO364G0307 ...4
Setaria italicaOrthologous gene familymany-to-manySeita.1G116700 Seita.3G218600 Seita.3G223100 ...17
Anchor point1-to-1Seita.5G060100 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.5G060100 1
Tree-based ortholog1-to-1Seita.5G060100 1
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g094700.2 Solyc02g087500.1 Solyc04g005840.1 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Solyc07g056320.2 1
Tree-based ortholog1-to-1Solyc07g056320.2 1
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G026100 Sobic.001G099300 Sobic.001G250200 ...13
Anchor point1-to-1Sobic.003G114200 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.003G114200 1
Tree-based ortholog1-to-1Sobic.003G114200 1
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0136700 Spipo11G0054200 Spipo23G0004300 ...10
Best-Hits-and-Inparalogs(BHI)family1-to-manySpipo6G0017900 Spipo6G0017600 2
Tree-based ortholog1-to-manySpipo6G0017600 Spipo6G0017900 2
Triticum aestivumOrthologous gene familymany-to-manyTAE01947G002 TAE06314G001 TAE06314G006 ...47
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE45424G001 TAE29028G001 TAE45304G001 3
Tree-based ortholog1-to-manyTAE45304G001 TAE45424G001 TAE29028G001 3
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01000777001 GSVIVG01016509001 GSVIVG01020114001 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01028152001 1
Tree-based ortholog1-to-1GSVIVG01028152001 1
Zea maysOrthologous gene familymany-to-manyZm00001d007714 Zm00001d010078 Zm00001d010520 ...15
Anchor point1-to-1Zm00001d040265 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d040265 1
Tree-based ortholog1-to-1Zm00001d040265 1
Zostera marinaOrthologous gene familymany-to-manyZosma112g00040 Zosma129g00190 Zosma28g00690 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma93g00640 1
Tree-based ortholog1-to-1Zosma93g00640 1
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00002.1.g13450.1.sm.mk Zjn_sc00009.1.g06180.1.am.mk Zjn_sc00009.1.g06200.1.am.mk ...21
Anchor point1-to-1Zjn_sc00043.1.g01680.1.am.mk 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00043.1.g01680.1.am.mk 1
Tree-based ortholog1-to-1Zjn_sc00043.1.g01680.1.am.mk 1
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