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Integrative Orthology Viewer:
Aco002079
(Ananas comosus)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Ananas comosus | Orthologous gene family | Aco002079 Aco007789 Aco016713 ... | 4 |  |
| Best-Hits-and-Inparalogs(BHI)family | Aco002079 | 1 | ||
| Tree-based ortholog | Aco002079 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR0752G056 ATR0820G079 ATR0820G277 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0752G056 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR0752G056 | 1 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT3G20500 AT3G52780 AT3G52810 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G20500 | 1 | ||
| Tree-based ortholog | 1-to-1 | AT3G20500 | 1 | ||
| Brachypodium distachyon | Orthologous gene family | many-to-many | Bradi1g15730 Bradi4g42500 Bradi4g42517 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi1g15730 | 1 | ||
| Tree-based ortholog | 1-to-1 | Bradi1g15730 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Cre11.g476700 Cre13.g578350 | 2 | |
| Tree-based ortholog | 1-to-many | Cre13.g578350 Cre11.g476700 Cre16.g672250 | 3 | ||
| Elaeis guineensis | Orthologous gene family | many-to-many | EGU1863G0006 EGU1863G0035 EGU2441G2273 | 3 | |
| Anchor point | N/A | EGU2441G2273 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EGU2441G2273 | 1 | ||
| Tree-based ortholog | 1-to-1 | EGU2441G2273 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-many | HVU0037G2916 HVU0037G2989 HVU0037G3682 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0042G0923 | 1 | ||
| Tree-based ortholog | 1-to-1 | HVU0042G0923 | 1 | ||
| Marchantia polymorpha | Orthologous gene family | many-to-many | Mapoly0003s0101 Mapoly0003s0103 Mapoly0184s0010 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0184s0010 | 1 | ||
| Tree-based ortholog | 1-to-1 | Mapoly0184s0010 | 1 | ||
| Micromonas commoda | Orthologous gene family | many-to-many | MCO03G476 MCO09G411 MCO13G335 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO09G411 | 1 | ||
| Tree-based ortholog | 1-to-1 | MCO09G411 | 1 | ||
| Musa acuminata | Orthologous gene family | many-to-many | MAC02G0079 MAC06G0266 MAC06G0595 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MAC02G0079 MAC06G2651 | 2 | ||
| Tree-based ortholog | 1-to-many | MAC06G2651 MAC02G0079 | 2 | ||
| Oropetium thomaeum | Orthologous gene family | many-to-many | Oropetium_20150105_08679 Oropetium_20150105_10949 Oropetium_20150105_15043 ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Oropetium_20150105_26847 | 1 | ||
| Tree-based ortholog | 1-to-1 | Oropetium_20150105_26847 | 1 | ||
| Oryza brachyantha | Orthologous gene family | many-to-many | OB03G32570 OB04G18870 OB11G12670 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB03G32570 | 1 | ||
| Tree-based ortholog | 1-to-1 | OB03G32570 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-many | OsR498G0306403000.01 OsR498G0408520800.01 OsR498G1119427200.01 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0306403000.01 | 1 | ||
| Tree-based ortholog | 1-to-1 | OsR498G0306403000.01 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | LOC_Os03g37130 LOC_Os04g33530 LOC_Os11g05400 ... | 6 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os03g37130 | 1 | ||
| Tree-based ortholog | 1-to-1 | LOC_Os03g37130 | 1 | ||
| Phalaenopsis equestris | Orthologous gene family | many-to-many | PEQU_06100 PEQU_07765 PEQU_07768 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PEQU_06100 | 1 | ||
| Tree-based ortholog | 1-to-1 | PEQU_06100 | 1 | ||
| Phyllostachys edulis | Orthologous gene family | many-to-many | PH01000572G0680 PH01002570G0180 PH01003270G0090 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01000572G0680 | 1 | ||
| Tree-based ortholog | 1-to-1 | PH01000572G0680 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | Pp3c18_18880 Pp3c20_2660 Pp3c23_18060 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Pp3c23_5960 | 1 | ||
| Tree-based ortholog | 1-to-many | Pp3c20_2660 Pp3c23_18060 Pp3c8_22370 | 3 | ||
| Picea abies | Orthologous gene family | many-to-many | PAB00003162 PAB00013731 PAB00016343 ... | 10 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PAB00024257 PAB00003162 | 2 | ||
| Tree-based ortholog | 1-to-many | PAB00003162 PAB00024257 | 2 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | Potri.001G423700 Potri.003G030700 Potri.011G138200 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.001G423700 Potri.011G138200 | 2 | ||
| Tree-based ortholog | 1-to-many | Potri.011G138200 Potri.001G423700 | 2 | ||
| Selaginella moellendorffii | Orthologous gene family | many-to-many | SMO115G0238 SMO134G0179 SMO239G0165 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SMO239G0165 | 1 | ||
| Tree-based ortholog | 1-to-1 | SMO304G0112 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-many | Seita.7G089500 Seita.7G323900 Seita.7G324000 ... | 5 | |
| Anchor point | N/A | Seita.9G183900 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.9G183900 | 1 | ||
| Tree-based ortholog | 1-to-1 | Seita.9G183900 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-many | Solyc07g064500.2 Solyc09g009600.1 Solyc09g009610.1 ... | 4 | |
| Anchor point | N/A | Solyc07g064500.2 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Solyc07g064500.2 Solyc10g006300.2 | 2 | ||
| Tree-based ortholog | 1-to-many | Solyc10g006300.2 Solyc07g064500.2 | 2 | ||
| Sorghum bicolor | Orthologous gene family | many-to-many | Sobic.001G186800 Sobic.005G107700 Sobic.006G068100 ... | 5 | |
| Anchor point | N/A | Sobic.001G186800 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.001G186800 | 1 | ||
| Tree-based ortholog | 1-to-1 | Sobic.001G186800 | 1 | ||
| Spirodela polyrhiza | Orthologous gene family | many-to-many | Spipo0G0005800 Spipo0G0172100 Spipo13G0002100 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo7G0017700 | 1 | ||
| Tree-based ortholog | 1-to-1 | Spipo7G0017700 | 1 | ||
| Triticum aestivum | Orthologous gene family | many-to-many | TAE06625G001 TAE06625G003 TAE06625G004 ... | 15 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE25963G002 TAE30882G002 | 2 | ||
| Tree-based ortholog | 1-to-many | TAE25963G002 TAE56638G002 TAE30882G002 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | GSVIVG01033822001 GSVIVG01033823001 GSVIVG01037630001 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01037630001 | 1 | ||
| Tree-based ortholog | 1-to-1 | GSVIVG01037630001 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | Zm00001d023404 Zm00001d023410 Zm00001d025343 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zm00001d023404 | 1 | ||
| Tree-based ortholog | 1-to-1 | Zm00001d033056 | 1 | ||
| Zostera marina | Orthologous gene family | many-to-many | Zosma19g01320 Zosma273g00050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zosma19g01320 | 1 | ||
| Tree-based ortholog | 1-to-1 | Zosma19g01320 | 1 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | many-to-many | Zjn_sc00019.1.g00200.1.am.mkhc Zjn_sc00028.1.g02450.1.sm.mkhc Zjn_sc00031.1.g01290.1.sm.mkhc ... | 7 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00031.1.g01290.1.sm.mkhc | 1 | ||
| Tree-based ortholog | 1-to-1 | Zjn_sc00019.1.g00200.1.am.mkhc | 1 |