Integrative Orthology Viewer: AT5G54960 (Arabidopsis thaliana) top


Inparalogs

Organism Source Genes #genes Details
Arabidopsis thalianaOrthologous gene familyAT4G33070 AT5G01320 AT5G01330 ...4
Best-Hits-and-Inparalogs(BHI)familyAT5G54960 1
Tree-based orthologAT5G54960 1

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-1ATR0681G146 1
Anchor pointN/AATR0752G194 1
Best-Hits-and-Inparalogs(BHI)family1-to-1ATR0681G146 1
Tree-based ortholog1-to-1ATR0681G146 1
Ananas comosusOrthologous gene familymany-to-manyAco001580 Aco012481 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Aco001580 1
Tree-based ortholog1-to-manyAco001580 Aco012481 2
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g16660 Bradi1g65440 Bradi2g03840 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Bradi1g65440 1
Tree-based ortholog1-to-manyBradi1g16660 Bradi1g65440 Bradi2g03840 3
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre03.g165700 1
Best-Hits-and-Inparalogs(BHI)family1-to-1Cre03.g165700 1
Tree-based ortholog1-to-1Cre03.g165700 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU1876G0275 EGU2441G1343 EGU2621G0728 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyEGU2621G0728 EGU2621G1057 2
Tree-based ortholog1-to-1EGU2621G0728 1
Hordeum vulgareOrthologous gene familymany-to-manyHVU0037G2281 HVU0038G2392 HVU0038G2973 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1HVU0037G2281 1
Tree-based ortholog1-to-manyHVU0037G2281 HVU0038G2973 HVU0038G2392 3
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0095s0010 Mapoly0160s0004 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Mapoly0160s0004 1
Tree-based ortholog1-to-manyMapoly0160s0004 Mapoly0095s0010 2
Micromonas commodaBest-Hits-and-Inparalogs(BHI)family1-to-1MCO08G154 1
Musa acuminataOrthologous gene familymany-to-manyMAC01G0162 MAC01G1174 MAC05G2437 ...6
Best-Hits-and-Inparalogs(BHI)family1-to-1MAC01G0162 1
Tree-based ortholog1-to-1MAC01G0162 1
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_01014 Oropetium_20150105_04826 Oropetium_20150105_07181 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Oropetium_20150105_01014 1
Tree-based ortholog1-to-manyOropetium_20150105_10123 Oropetium_20150105_01014 Oropetium_20150105_04826 ...4
Oryza brachyanthaOrthologous gene familymany-to-manyOB01G13810 OB03G23620 OB05G27370 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1OB03G23620 1
Tree-based ortholog1-to-manyOB07G32810 OB03G23620 OB01G13810 3
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0100211200.01 OsR498G0305742800.01 OsR498G0511018100.01 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1OsR498G0305742800.01 1
Tree-based ortholog1-to-manyOsR498G0715012300.01 OsR498G0305742800.01 OsR498G0511018100.01 ...5
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os01g06660 LOC_Os03g18220 LOC_Os05g39310 ...5
Best-Hits-and-Inparalogs(BHI)family1-to-1LOC_Os03g18220 1
Tree-based ortholog1-to-manyLOC_Os07g49250 LOC_Os03g18220 LOC_Os05g39310 ...5
Phalaenopsis equestrisOrthologous gene familymany-to-manyPEQU_10546 PEQU_28289 2
Best-Hits-and-Inparalogs(BHI)family1-to-1PEQU_28289 1
Tree-based ortholog1-to-manyPEQU_10546 PEQU_28289 2
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000322G0030 PH01000465G0110 2
Best-Hits-and-Inparalogs(BHI)family1-to-manyPH01000322G0030 PH01000465G0110 2
Tree-based ortholog1-to-manyPH01000322G0030 PH01000465G0110 2
Physcomitrella patensOrthologous gene familymany-to-manyPp3c17_2040 Pp3c19_19330 Pp3c1_22470 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manyPp3c3_15510 Pp3c1_22470 2
Tree-based ortholog1-to-manyPp3c19_19330 Pp3c17_2040 2
Picea abiesOrthologous gene familymany-to-manyPAB00020807 PAB00021036 PAB00021369 ...7
Best-Hits-and-Inparalogs(BHI)family1-to-1PAB00025691 1
Tree-based ortholog1-to-1PAB00020807 1
Populus trichocarpaOrthologous gene familymany-to-manyPotri.004G054100 Potri.006G102500 Potri.009G073700 ...8
Best-Hits-and-Inparalogs(BHI)family1-to-1Potri.016G120100 1
Tree-based ortholog1-to-manyPotri.016G120100 Potri.006G102500 Potri.T102400 ...6
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO307G0016 SMO358G0172 2
Best-Hits-and-Inparalogs(BHI)family1-to-1SMO307G0016 1
Tree-based ortholog1-to-1SMO358G0172 1
Setaria italicaOrthologous gene familymany-to-manySeita.2G442700 Seita.3G209500 Seita.5G113700 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Seita.9G439800 1
Tree-based ortholog1-to-manySeita.2G442700 Seita.9G439800 Seita.3G209500 ...4
Solanum lycopersicumOrthologous gene familymany-to-manySolyc02g077240.2 Solyc06g082130.2 Solyc09g005110.2 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-manySolyc10g076510.1 Solyc09g005110.2 2
Tree-based ortholog1-to-manySolyc10g076510.1 Solyc09g005110.2 Solyc02g077240.2 3
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G405500 Sobic.002G429000 Sobic.003G061300 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Sobic.001G405500 1
Tree-based ortholog1-to-manySobic.002G429000 Sobic.001G405500 Sobic.009G169000 ...4
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo22G0031300 Spipo23G0037900 Spipo6G0064400 3
Best-Hits-and-Inparalogs(BHI)family1-to-1Spipo22G0031300 1
Tree-based ortholog1-to-manySpipo22G0031300 Spipo23G0037900 Spipo6G0064400 3
Triticum aestivumOrthologous gene familymany-to-manyTAE02223G005 TAE06240G001 TAE15637G001 ...19
Best-Hits-and-Inparalogs(BHI)family1-to-manyTAE25029G003 TAE50113G001 TAE50113G002 ...4
Tree-based ortholog1-to-manyTAE31506G007 TAE49244G003 TAE34286G003 ...18
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01003940001 GSVIVG01021184001 GSVIVG01024702001 3
Best-Hits-and-Inparalogs(BHI)family1-to-1GSVIVG01003940001 1
Tree-based ortholog1-to-1GSVIVG01012373001 1
Zea maysOrthologous gene familymany-to-manyZm00001d008651 Zm00001d010588 Zm00001d022579 ...4
Best-Hits-and-Inparalogs(BHI)family1-to-1Zm00001d028759 1
Tree-based ortholog1-to-manyZm00001d022579 Zm00001d019176 Zm00001d028759 ...5
Zostera marinaOrthologous gene familymany-to-manyZosma114g00820 Zosma114g00830 2
Best-Hits-and-Inparalogs(BHI)family1-to-1Zosma114g00830 1
Tree-based ortholog1-to-manyZosma114g00830 Zosma114g00820 2
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00002.1.g05050.1.sm.mkhc Zjn_sc00003.1.g03650.1.sm.mkhc Zjn_sc00005.1.g05320.1.am.mk ...9
Best-Hits-and-Inparalogs(BHI)family1-to-1Zjn_sc00025.1.g04670.1.sm.mkhc 1
Tree-based ortholog1-to-manyZjn_sc00044.1.g05360.1.am.mk Zjn_sc00003.1.g03650.1.sm.mkhc Zjn_sc00002.1.g05050.1.sm.mkhc ...10
Download orthologs