Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
AT1G80090
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT1G15330 AT1G80090 | 2 |  |
| Anchor point | AT1G15330 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | AT1G80090 | 1 | ||
| Tree-based ortholog | AT1G80090 AT1G15330 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR0800G035 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR0800G035 | 1 | ||
| Tree-based ortholog | many-to-1 | ATR0800G035 | 1 | ||
| Ananas comosus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Aco016077 | 1 | |
| Brachypodium distachyon | Orthologous gene family | many-to-1 | Bradi3g04490 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Bradi3g04490 | 1 | ||
| Tree-based ortholog | many-to-1 | Bradi3g04490 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Cre12.g528000 | 1 | |
| Elaeis guineensis | Orthologous gene family | many-to-1 | EGU0881G1350 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EGU0881G1350 | 1 | ||
| Tree-based ortholog | many-to-1 | EGU0881G1350 | 1 | ||
| Hordeum vulgare | Orthologous gene family | many-to-1 | HVU0042G2325 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HVU0042G2325 | 1 | ||
| Marchantia polymorpha | Orthologous gene family | many-to-1 | Mapoly0007s0086 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Mapoly0007s0086 | 1 | ||
| Tree-based ortholog | many-to-1 | Mapoly0007s0086 | 1 | ||
| Micromonas commoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MCO15G016 | 1 | |
| Musa acuminata | Orthologous gene family | many-to-1 | MAC06G1594 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MAC06G1594 | 1 | ||
| Tree-based ortholog | many-to-1 | MAC06G1594 | 1 | ||
| Oropetium thomaeum | Orthologous gene family | many-to-1 | Oropetium_20150105_14392 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Oropetium_20150105_14392 | 1 | ||
| Tree-based ortholog | many-to-1 | Oropetium_20150105_14392 | 1 | ||
| Oryza brachyantha | Orthologous gene family | many-to-1 | OB02G13800 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OB02G13800 | 1 | ||
| Tree-based ortholog | many-to-1 | OB02G13800 | 1 | ||
| Oryza sativa ssp. indica | Orthologous gene family | many-to-1 | OsR498G0203006100.01 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OsR498G0203006100.01 | 1 | ||
| Tree-based ortholog | many-to-1 | OsR498G0203006100.01 | 1 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | LOC_Os02g06410 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LOC_Os02g06410 | 1 | ||
| Tree-based ortholog | many-to-1 | LOC_Os02g06410 | 1 | ||
| Phalaenopsis equestris | Orthologous gene family | many-to-1 | PEQU_02414 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PEQU_02414 | 1 | ||
| Tree-based ortholog | many-to-1 | PEQU_02414 | 1 | ||
| Phyllostachys edulis | Orthologous gene family | many-to-1 | PH01000093G1740 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PH01000093G1740 | 1 | ||
| Tree-based ortholog | many-to-1 | PH01000093G1740 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | Pp3c13_16980 Pp3c3_23830 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Pp3c3_23830 | 1 | ||
| Tree-based ortholog | many-to-many | Pp3c13_16980 Pp3c3_23830 | 2 | ||
| Picea abies | Orthologous gene family | many-to-1 | PAB00011876 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PAB00011876 | 1 | ||
| Tree-based ortholog | many-to-1 | PAB00011876 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | Potri.T058100 Potri.013G087100 Potri.019G052600 | 3 | |
| Selaginella moellendorffii | Orthologous gene family | many-to-1 | SMO201G0050 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SMO201G0050 | 1 | ||
| Tree-based ortholog | many-to-1 | SMO201G0050 | 1 | ||
| Setaria italica | Orthologous gene family | many-to-1 | Seita.1G080600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Seita.1G080600 | 1 | ||
| Tree-based ortholog | many-to-1 | Seita.1G080600 | 1 | ||
| Solanum lycopersicum | Orthologous gene family | many-to-1 | Solyc06g068160.2 | 1 | |
| Anchor point | 1-to-1 | Solyc06g068160.2 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Solyc06g068160.2 | 1 | ||
| Tree-based ortholog | many-to-1 | Solyc06g068160.2 | 1 | ||
| Sorghum bicolor | Orthologous gene family | many-to-1 | Sobic.004G047900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Sobic.004G047900 | 1 | ||
| Tree-based ortholog | many-to-1 | Sobic.004G047900 | 1 | ||
| Spirodela polyrhiza | Orthologous gene family | many-to-1 | Spipo5G0032200 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Spipo5G0032200 | 1 | ||
| Tree-based ortholog | many-to-1 | Spipo5G0032200 | 1 | ||
| Triticum aestivum | Orthologous gene family | many-to-many | TAE02410G002 TAE04508G001 TAE51833G001 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | TAE02410G002 TAE04508G001 | 2 | ||
| Tree-based ortholog | many-to-many | TAE02410G002 TAE04508G001 TAE51833G001 | 3 | ||
| Vitis vinifera | Orthologous gene family | many-to-1 | GSVIVG01017342001 | 1 | |
| Anchor point | 1-to-1 | GSVIVG01017342001 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GSVIVG01017342001 | 1 | ||
| Tree-based ortholog | many-to-1 | GSVIVG01017342001 | 1 | ||
| Zea mays | Orthologous gene family | many-to-1 | Zm00001d015310 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zm00001d015310 | 1 | ||
| Tree-based ortholog | many-to-1 | Zm00001d015310 | 1 | ||
| Zostera marina | Orthologous gene family | many-to-1 | Zosma107g00180 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zosma107g00180 | 1 | ||
| Tree-based ortholog | many-to-1 | Zosma107g00180 | 1 | ||
| Zoysia japonica ssp. nagirizaki | Orthologous gene family | many-to-many | Zjn_sc00045.1.g03740.1.sm.mk Zjn_sc00045.1.g03750.1.sm.mk | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | Zjn_sc00045.1.g03750.1.sm.mk | 1 | ||
| Tree-based ortholog | many-to-1 | Zjn_sc00045.1.g03750.1.sm.mk | 1 |