Integrative Orthology Viewer: AT1G54580 (Arabidopsis thaliana) top


Inparalogs

Organism Source Genes #genes Details
Arabidopsis thalianaOrthologous gene familyAT1G54580 AT1G54630 AT3G05020 ...5
Best-Hits-and-Inparalogs(BHI)familyAT1G54630 AT1G54580 2
Tree-based orthologAT1G54630 AT1G54580 2

Orthologs

Organism Source Type Genes #genes Details
Amborella trichopodaOrthologous gene familymany-to-manyATR0582G065 ATR0681G319 ATR0706G235 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1ATR0706G235 1
Tree-based orthologmany-to-manyATR0706G235 ATR0582G065 2
Ananas comosusOrthologous gene familymany-to-manyAco007292 Aco017814 Aco026066 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Aco026066 1
Tree-based orthologmany-to-1Aco007292 1
Brachypodium distachyonOrthologous gene familymany-to-manyBradi1g01000 Bradi3g42320 Bradi4g05860 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Bradi4g36560 1
Tree-based orthologmany-to-manyBradi3g42320 Bradi4g36560 2
Chlamydomonas reinhardtiiOrthologous gene familymany-to-1Cre13.g577100 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1Cre13.g577100 1
Tree-based orthologmany-to-1Cre13.g577100 1
Elaeis guineensisOrthologous gene familymany-to-manyEGU0935G0257 EGU1634G0684 EGU2028G0362 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-manyEGU2621G0640 EGU2028G0362 2
Tree-based orthologmany-to-manyEGU2028G0362 EGU2621G0640 EGU2620G0007 3
Hordeum vulgareOrthologous gene familymany-to-manyHVU0041G0150 HVU0041G0934 HVU0041G1984 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-1HVU0045G1850 1
Tree-based orthologmany-to-1HVU0045G1850 1
Marchantia polymorphaOrthologous gene familymany-to-manyMapoly0009s0168 Mapoly0030s0067 2
Best-Hits-and-Inparalogs(BHI)familymany-to-1Mapoly0030s0067 1
Tree-based orthologmany-to-1Mapoly0009s0168 1
Micromonas commodaOrthologous gene familymany-to-1MCO16G287 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1MCO16G287 1
Tree-based orthologmany-to-1MCO16G287 1
Musa acuminataOrthologous gene familymany-to-manyMAC02G0482 MAC04G2690 MAC06G0050 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manyMAC06G0050 MAC02G0482 2
Tree-based orthologmany-to-manyMAC02G0482 MAC06G0050 MAC04G2690 3
Oropetium thomaeumOrthologous gene familymany-to-manyOropetium_20150105_06524 Oropetium_20150105_14545 Oropetium_20150105_23590 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1Oropetium_20150105_14545 1
Tree-based orthologmany-to-manyOropetium_20150105_14545 Oropetium_20150105_06524 2
Oryza brachyanthaOrthologous gene familymany-to-manyOB03G48590 OB08G29590 OB09G24520 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1OB08G29590 1
Tree-based orthologmany-to-manyOB08G29590 OB09G24520 2
Oryza sativa ssp. indicaOrthologous gene familymany-to-manyOsR498G0307392200.01 OsR498G0816582400.01 OsR498G0917880200.01 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1OsR498G0816582400.01 1
Tree-based orthologmany-to-manyOsR498G0816582400.01 OsR498G0917880200.01 2
Oryza sativa ssp. japonicaOrthologous gene familymany-to-manyLOC_Os03g63930 LOC_Os08g43580 LOC_Os09g36860 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1LOC_Os08g43580 1
Tree-based orthologmany-to-manyLOC_Os08g43580 LOC_Os09g36860 2
Phalaenopsis equestrisOrthologous gene familymany-to-1PEQU_29231 1
Best-Hits-and-Inparalogs(BHI)familymany-to-1PEQU_29231 1
Tree-based orthologmany-to-1PEQU_29231 1
Phyllostachys edulisOrthologous gene familymany-to-manyPH01000332G0470 PH01000511G0690 PH01000535G0670 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPH01000511G0690 PH01000332G0470 2
Tree-based orthologmany-to-manyPH01001490G0300 PH01001071G0480 PH01000332G0470 ...4
Physcomitrella patensOrthologous gene familymany-to-manyPp3c14_24710 Pp3c17_24100 Pp3c17_24230 3
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPp3c14_24710 Pp3c17_24230 Pp3c17_24100 3
Tree-based orthologmany-to-manyPp3c17_24100 Pp3c17_24230 Pp3c14_24710 3
Picea abiesOrthologous gene familymany-to-manyPAB00004471 PAB00007417 PAB00007418 ...6
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPAB00007418 PAB00009082 2
Tree-based orthologmany-to-manyPAB00009083 PAB00007418 PAB00007934 ...6
Populus trichocarpaOrthologous gene familymany-to-manyPotri.005G044800 Potri.006G217800 Potri.008G195600 ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-manyPotri.005G044800 Potri.013G031300 2
Tree-based orthologmany-to-manyPotri.013G031300 Potri.005G044800 2
Selaginella moellendorffiiOrthologous gene familymany-to-manySMO143G0179 SMO143G0214 SMO147G0413 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manySMO364G0012 SMO143G0179 SMO147G0413 3
Tree-based orthologmany-to-manySMO143G0179 SMO364G0012 2
Setaria italicaOrthologous gene familymany-to-manySeita.2G290900 Seita.3G346000 Seita.6G240000 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Seita.3G346000 1
Tree-based orthologmany-to-manySeita.6G240000 Seita.2G290900 2
Solanum lycopersicumOrthologous gene familymany-to-manySolyc01g067730.2 Solyc02g038720.1 Solyc03g118410.2 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-manySolyc06g054510.2 Solyc01g067730.2 2
Tree-based orthologmany-to-manySolyc01g067730.2 Solyc06g054510.2 2
Sorghum bicolorOrthologous gene familymany-to-manySobic.001G005700 Sobic.002G280400 Sobic.005G128100 ...5
Best-Hits-and-Inparalogs(BHI)familymany-to-1Sobic.002G280400 1
Tree-based orthologmany-to-manySobic.007G176800 Sobic.002G280400 2
Spirodela polyrhizaOrthologous gene familymany-to-manySpipo0G0087500 Spipo22G0010600 Spipo3G0042500 3
Best-Hits-and-Inparalogs(BHI)familymany-to-1Spipo3G0042500 1
Tree-based orthologmany-to-1Spipo22G0010600 1
Triticum aestivumOrthologous gene familymany-to-manyTAE00935G006 TAE02026G001 TAE02654G002 ...13
Best-Hits-and-Inparalogs(BHI)familymany-to-manyTAE18019G003 TAE07085G001 TAE16376G001 3
Tree-based orthologmany-to-manyTAE20182G001 TAE32724G001 TAE00935G006 ...7
Vitis viniferaOrthologous gene familymany-to-manyGSVIVG01004932001 GSVIVG01016702001 GSVIVG01017817001 ...4
Best-Hits-and-Inparalogs(BHI)familymany-to-1GSVIVG01021969001 1
Tree-based orthologmany-to-manyGSVIVG01017817001 GSVIVG01021969001 2
Zea maysOrthologous gene familymany-to-manyZm00001d012818 Zm00001d022616 Zm00001d023887 ...8
Best-Hits-and-Inparalogs(BHI)familymany-to-1Zm00001d022616 1
Tree-based orthologmany-to-manyZm00001d053228 Zm00001d032019 Zm00001d022616 ...4
Zostera marinaOrthologous gene familymany-to-manyZosma23g00140 Zosma3g01100 2
Best-Hits-and-Inparalogs(BHI)familymany-to-manyZosma23g00140 Zosma3g01100 2
Tree-based orthologmany-to-manyZosma3g01100 Zosma23g00140 2
Zoysia japonica ssp. nagirizakiOrthologous gene familymany-to-manyZjn_sc00013.1.g10440.1.sm.mkhc Zjn_sc00015.1.g07500.1.sm.mkhc Zjn_sc00078.1.g02760.1.sm.mkhc ...7
Best-Hits-and-Inparalogs(BHI)familymany-to-manyZjn_sc00015.1.g07500.1.sm.mkhc Zjn_sc00078.1.g02760.1.sm.mkhc 2
Tree-based orthologmany-to-manyZjn_sc00078.1.g02760.1.sm.mkhc Zjn_sc00015.1.g07500.1.sm.mkhc Zjn_sc00122.1.g00220.1.sm.mkhc 3
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