Functional Clusters   top

Cluster information

Cluster identifier
CH_sly_828
Species
Solanum lycopersicum
Chromosome
SL2.50ch07
E-value
0.000783666
Data type
InterPro
Data identifier
IPR009072
Data description
Histone-fold

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species

Gene information

In cluster Gene id Description Gene type Gene family
X Solyc07g065500.1Nuclear transcription factor Y subunit B-3 (AHRD V1 **** B6SUG8_MAIZE); contains Interpro domain(s) IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomeraseCoding geneHOM04M000233 ORTHO04M000230
X Solyc07g065510.2Glycine-rich RNA binding protein (AHRD V1 *-*- B7SDF0_ORYSJ); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait IPR000504 RNA recognition motif, RNP-1Coding geneHOM04M003067 ORTHO04M003457
X Solyc07g065520.2Glycine-rich RNA-binding protein (AHRD V1 *--- Q9XEL4_PICGL); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1Coding geneHOM04M003067 ORTHO04M003457
X Solyc07g065530.1Unknown Protein (AHRD V1)Coding geneorphan geneorphan gene
X Solyc07g065540.1Fasciclin-like arabinogalactan protein 10 (AHRD V1 ***- A9XTL5_GOSHI); contains Interpro domain(s) IPR000782 FAS1 domainCoding geneHOM04M000154 ORTHO04M000545
X Solyc07g065550.2NAD-dependent deacetylase (AHRD V1 *-*- B1QRD7_CLOBO); contains Interpro domain(s) IPR003000 NAD-dependent histone deacetylase, silent information regulator Sir2Coding geneHOM04M005111 ORTHO04M006764
X Solyc07g065560.1Histone H2B (AHRD V1 ***- A9NZJ5_PICSI); contains Interpro domain(s) IPR000558 Histone H2BCoding geneHOM04M000238 orphan gene
X Solyc07g065570.1Nuclear transcription factor Y subunit B-6 (AHRD V1 *-*- B6UH02_MAIZE); contains Interpro domain(s) IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomeraseCoding geneHOM04M000233 orphan gene
X Solyc07g065580.1Nuclear transcription factor Y subunit B-6 (AHRD V1 *-** B6UH02_MAIZE); contains Interpro domain(s) IPR003957 Transcription factor, CBFA/NFYB, DNA topoisomeraseCoding geneHOM04M000233 orphan gene