Functional Clusters   top

Cluster information

Cluster identifier
CH_cre_3
Species
Chlamydomonas reinhardtii
Chromosome
chromosome_6
E-value
1.45594e-31
Data type
InterPro
Data identifier
IPR009072
Data description
Histone-fold

Statistics

Gene family Num genes total Num genes species Num genes cluster Num species

Gene information

In cluster Gene id Description Gene type Gene family
X Cre06.g264600Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g264650Replication-linked Histone H3. ChromoDB HTR3401,HTR3402, and HTR3403 (these seem to now be merged into this one gene model)Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g264700No description available.Coding geneHOM04M021620 orphan gene
X Cre06.g264750Histone H2ACoding geneHOM04M000147 ORTHO04M000156
X Cre06.g264800Histone H2BCoding geneHOM04M000238 ORTHO04M000170
X Cre06.g264850No description available.Coding geneHOM04M022224 ORTHO04M018574
X Cre06.g264900Histone H2BCoding geneHOM04M000238 ORTHO04M000170
X Cre06.g264950Histone H2ACoding geneHOM04M000147 ORTHO04M000156
X Cre06.g265000Replication-linked Histone H3Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g265050Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g265100No description available.Coding geneHOM04M000544 ORTHO04M018652
X Cre06.g265150No description available.Coding geneHOM04M000265 ORTHO04M016398
X Cre06.g265200Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g265250No description available.Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g265300No description available.Coding geneHOM04M021620 orphan gene
X Cre06.g265350Histone H2ACoding geneHOM04M000147 ORTHO04M000156
X Cre06.g265400Histone H2BCoding geneHOM04M000238 ORTHO04M000170
X Cre06.g265450Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g265500No description available.Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g265550No description available.Coding geneHOM04M000048 orphan gene
X Cre06.g265602No description available.Coding geneorphan geneorphan gene
X Cre06.g265652No description available.Coding geneHOM04M007823 orphan gene
X Cre06.g265750No description available.Coding geneHOM04M008795 ORTHO04M011393
X Cre06.g265800Plastid ribosomal protein L28Coding geneHOM04M006122 ORTHO04M007331
X Cre06.g265850Serine peptidase of the S41 family; homologous to C-terminal processing peptidase, D1 processing peptidase; contains a PDZ domain; could be involved in TRPl mediated signaling cascade (Suneel Kateriya). Previously annotated as TSP2, but this conflicts wiCoding geneHOM04M001317 ORTHO04M005565
X Cre06.g265900No description available.Coding geneHOM04M002413 ORTHO04M002796
X Cre06.g265950Flagellar inner arm dynein heavy chain (monomeric). Has not been identified in Chlamydomonas flagella in mass spec proteomic study by Yagi et al. [PMID: 19351714]; novel minor type found exclusively at the flagellar basal portion. Most similar to DHC7Coding geneHOM04M002205 ORTHO04M006807
X Cre06.g266000Serine/threonine protein kinaseCoding geneHOM04M007080 orphan gene
X Cre06.g266052No description available.Coding geneHOM04M015334 orphan gene
X Cre06.g266100No description available.Coding geneHOM04M007080 orphan gene
X Cre06.g266150No description available.Coding geneHOM04M007080 orphan gene
X Cre06.g266200No description available.Coding geneHOM04M015334 orphan gene
X Cre06.g266250No description available.Coding geneHOM04M007080 orphan gene
X Cre06.g266276No description available.Coding geneHOM04M004393 orphan gene
X Cre06.g266300No description available.Coding geneHOM04M015334 orphan gene
X Cre06.g266350No description available.Coding geneHOM04M015334 orphan gene
X Cre06.g266383No description available.Coding geneHOM04M000117 orphan gene
X Cre06.g266416No description available.Coding geneHOM04M000117 ORTHO04M002890
X Cre06.g266450No description available.Coding geneHOM04M007080 orphan gene
X Cre06.g266500No description available.Coding geneorphan geneorphan gene
X Cre06.g266550No description available.Coding geneorphan geneorphan gene
X Cre06.g266600Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g266650Replication-linked Histone H3Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g266700No description available.Coding geneHOM04M000147 ORTHO04M000156
X Cre06.g266750No description available.Coding geneHOM04M000238 ORTHO04M000170
X Cre06.g266800No description available.Coding geneHOM04M009111 ORTHO04M011623
X Cre06.g266850No description available.Coding geneHOM04M013844 orphan gene
X Cre06.g266900No description available.Coding geneHOM04M002398 ORTHO04M008468
X Cre06.g266950No description available.Coding geneHOM04M013844 orphan gene
X Cre06.g267000No description available.Coding geneHOM04M002670 ORTHO04M003251
X Cre06.g267050No description available.Coding geneorphan geneorphan gene
X Cre06.g267100Subunit of the Signal Recognition ParticleCoding geneHOM04M004467 ORTHO04M005784
X Cre06.g267150No description available.Coding geneHOM04M004143 ORTHO04M005143
X Cre06.g267200NADH:ubiquinone oxidoreductase (Complex I) 13 kDa subunit, mitochondrial; gi|34334028|gb|AAQ64641.1| [PMID: 15450959; PMID: 15710684] (similar to Neurospora crassa NUO20.9 protein, human NDUFS6).Coding geneorphan geneorphan gene
X Cre06.g267250Dual-specificity protein phosphatase. Previously annotated as MKP2Coding geneHOM04M001632 orphan gene
X Cre06.g267300No description available.Coding geneorphan geneorphan gene
X Cre06.g267350No description available.Coding geneHOM04M028122 ORTHO04M018756
X Cre06.g267400No description available.Coding geneHOM04M000024 orphan gene
X Cre06.g267450No description available.Coding geneorphan geneorphan gene
X Cre06.g267476No description available.Coding geneorphan geneorphan gene
X Cre06.g267500No description available.Coding geneHOM04M002960 ORTHO04M003549
X Cre06.g267550Similar to Bardet-Biedl syndrome 5Coding geneHOM04M025983 ORTHO04M018495
X Cre06.g267600Lycopene epsilon cyclaseCoding geneHOM04M001947 ORTHO04M008470
X Cre06.g267650No description available.Coding geneHOM04M000031 orphan gene
X Cre06.g267700Signal peptide peptidaseCoding geneHOM04M003884 ORTHO04M004524
X Cre06.g267750No description available.Coding geneHOM04M008511 orphan gene
X Cre06.g267800Mitochondrial substrate carrier proteinCoding geneHOM04M002554 ORTHO04M002744
X Cre06.g267850Phospholipid scramblase. Metazoan scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site. Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifsCoding geneHOM04M004933 ORTHO04M006029
X Cre06.g267900No description available.Coding geneHOM04M002868 ORTHO04M003235
X Cre06.g267950Replication-linked Histone H3Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g268000Histone H4Coding geneHOM04M000209 ORTHO04M000134
X Cre06.g268050Histone H2ACoding geneHOM04M000147 ORTHO04M000156
X Cre06.g268100Histone H2BCoding geneHOM04M000238 ORTHO04M000170
X Cre06.g268150NimA-related protein kinaseCoding geneHOM04M000679 ORTHO04M000631
X Cre06.g268200Similar to permease domain of putative lipid transfer machineCoding geneHOM04M005793 ORTHO04M007233
X Cre06.g268228No description available.Coding geneHOM04M010708 orphan gene
X Cre06.g268250Histone H2BCoding geneHOM04M000238 ORTHO04M000170
X Cre06.g268300Histone H2ACoding geneHOM04M000147 ORTHO04M000156
X Cre06.g268350Replication-linked Histone H3Coding geneHOM04M000163 ORTHO04M000094
X Cre06.g268400Histone H4Coding geneHOM04M000209 ORTHO04M000134