PLAZA 4.0 Monocots : Functional Clustering

Functional clusters

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Ananas comosus	LG09	5	CH_aco_129	3	3	0.0000801907
Ananas comosus	LG09	6	CH_aco_129	3	3	0.0000801907
Populus trichocarpa	Chr01	5	CH_ptr_437	7	70	0.00000160051
Populus trichocarpa	Chr01	6	CH_ptr_437	7	70	0.00000160051

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
3	GO	All GO data.	2	30	80	0.001	X
5	InterPro	No filter applied.	2	30	80	0.001	X
6	InterPro	No filter applied.	2	30	80	0.001	V
2	GO	Primary GO data only.	2	30	80	0.001	V
1	GO	Primary GO data only.	2	30	80	0.001	X
4	GO	All GO data.	2	30	80	0.001	V