Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR001611
Description
Leucine-rich repeat

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodaAmTr_v1.0_scaffold000295CH_atr_1688160.0000000299655
Amborella trichopodaAmTr_v1.0_scaffold000296CH_atr_1688160.0000000299655
Ananas comosusLG165CH_aco_199440.000359855
Ananas comosusLG166CH_aco_199440.000359855
Arabidopsis thalianaChr15CH_ath_464450.000258349
Arabidopsis thalianaChr25CH_ath_312580.0000148731
Arabidopsis thalianaChr16CH_ath_464450.000258349
Arabidopsis thalianaChr26CH_ath_312580.0000148731
Brachypodium distachyonBd35CH_bdi_3014253.60421e-17
Brachypodium distachyonBd45CH_bdi_5097270.000436848
Brachypodium distachyonBd45CH_bdi_1697100.0000000692881
Brachypodium distachyonBd36CH_bdi_3014253.60421e-17
Brachypodium distachyonBd46CH_bdi_1697100.0000000692881
Brachypodium distachyonBd46CH_bdi_5097270.000436848
Elaeis guineensisNC_025996.15CH_egu_19310460.0000319049
Elaeis guineensisNC_025996.16CH_egu_19310460.0000319049
Hordeum vulgare65CH_hvu_1088340.000249603
Hordeum vulgare66CH_hvu_1088340.000249603
Musa acuminatachr35CH_mac_416257.4063e-20
Musa acuminatachr65CH_mac_83780.0000000245057
Musa acuminatachr36CH_mac_416257.4063e-20
Musa acuminatachr66CH_mac_83780.0000000245057
Oryza brachyantha105CH_obr_2716100.0000079174
Oryza brachyantha115CH_obr_1308140.0000000114232
Oryza brachyantha115CH_obr_2967190.0000179535
Oryza brachyantha65CH_obr_10512500.00000000349951
Oryza brachyantha106CH_obr_2716100.0000079174
Oryza brachyantha116CH_obr_2967190.0000179535
Oryza brachyantha116CH_obr_1308140.0000000114232
Oryza brachyantha66CH_obr_10512500.00000000349951
Oryza sativa ssp. indicaChr105CH_osaindica_344680.00000378442
Oryza sativa ssp. indicaChr115CH_osaindica_5113171.25916e-17
Oryza sativa ssp. indicaChr115CH_osaindica_630703.67433e-34
Oryza sativa ssp. indicaChr25CH_osaindica_10912270.00000000000670589
Oryza sativa ssp. indicaChr25CH_osaindica_7913260.0000000000000947673
Oryza sativa ssp. indicaChr65CH_osaindica_13213430.000000000144206
Oryza sativa ssp. indicaChr106CH_osaindica_344680.00000378442
Oryza sativa ssp. indicaChr116CH_osaindica_5113171.25916e-17
Oryza sativa ssp. indicaChr116CH_osaindica_630703.67433e-34
Oryza sativa ssp. indicaChr26CH_osaindica_7913260.0000000000000947673
Oryza sativa ssp. indicaChr26CH_osaindica_10912270.00000000000670589
Oryza sativa ssp. indicaChr66CH_osaindica_13213430.000000000144206
Oryza sativa ssp. japonicaChr15CH_osa_8512170.00000000000000178981
Oryza sativa ssp. japonicaChr105CH_osa_5836120.000102256
Oryza sativa ssp. japonicaChr115CH_osa_4321561.02151e-21
Oryza sativa ssp. japonicaChr115CH_osa_4415191.77632e-21
Oryza sativa ssp. japonicaChr25CH_osa_5959450.000115684
Oryza sativa ssp. japonicaChr25CH_osa_58210600.0000989488
Oryza sativa ssp. japonicaChr25CH_osa_1025325.85637e-38
Oryza sativa ssp. japonicaChr65CH_osa_28510310.0000000793407
Oryza sativa ssp. japonicaChr16CH_osa_8512170.00000000000000178981
Oryza sativa ssp. japonicaChr106CH_osa_5836120.000102256
Oryza sativa ssp. japonicaChr116CH_osa_4415191.77632e-21
Oryza sativa ssp. japonicaChr116CH_osa_4321561.02151e-21
Oryza sativa ssp. japonicaChr26CH_osa_5959450.000115684
Oryza sativa ssp. japonicaChr26CH_osa_1025325.85637e-38
Oryza sativa ssp. japonicaChr26CH_osa_58210600.0000989488
Oryza sativa ssp. japonicaChr66CH_osa_28510310.0000000793407
Populus trichocarpaChr125CH_ptr_11216330.00000000000000653517
Populus trichocarpaChr185CH_ptr_2919140.0000000197666
Populus trichocarpaChr126CH_ptr_11216330.00000000000000653517
Populus trichocarpaChr186CH_ptr_2919140.0000000197666
Selaginella moellendorffiiscaffold_115CH_smo_1447170.0000105106
Selaginella moellendorffiiscaffold_116CH_smo_1447170.0000105106
Setaria italicascaffold_15CH_sit_1922361.02159e-26
Setaria italicascaffold_45CH_sit_5938260.000130997
Setaria italicascaffold_55CH_sit_14912250.0000000000247576
Setaria italicascaffold_85CH_sit_24515750.0000000191127
Setaria italicascaffold_85CH_sit_13315440.00000000000299402
Setaria italicascaffold_16CH_sit_1922361.02159e-26
Setaria italicascaffold_46CH_sit_5938260.000130997
Setaria italicascaffold_56CH_sit_14912250.0000000000247576
Setaria italicascaffold_86CH_sit_24515750.0000000191127
Setaria italicascaffold_86CH_sit_13315440.00000000000299402
Solanum lycopersicumSL2.50ch125CH_sly_13012280.00000000000524888
Solanum lycopersicumSL2.50ch126CH_sly_13012280.00000000000524888
Triticum aestivumTGACv1_scaffold_177171_2DS5CH_tae_4790.000000000102448
Triticum aestivumTGACv1_scaffold_177171_2DS6CH_tae_4790.000000000102448
Vitis viniferachr185CH_vvi_441680.0000399681
Vitis viniferachr65CH_vvi_440680.0000399681
Vitis viniferachr95CH_vvi_3499200.00000149237
Vitis viniferachr186CH_vvi_441680.0000399681
Vitis viniferachr66CH_vvi_440680.0000399681
Vitis viniferachr96CH_vvi_3499200.00000149237
Zea mays45CH_zma_1447130.000000198532
Zea mays46CH_zma_1447130.000000198532
Zoysia japonica ssp. nagirizakiZjn_sc00011.15CH_zjn_461470.000537608
Zoysia japonica ssp. nagirizakiZjn_sc00011.16CH_zjn_461470.000537608

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
3GOAll GO data.230800.001X
5InterProNo filter applied.230800.001X
6InterProNo filter applied.230800.001V
2GOPrimary GO data only.230800.001V
1GOPrimary GO data only.230800.001X
4GOAll GO data.230800.001V