Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR000873
Description
AMP-dependent synthetase/ligase

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodaAmTr_v1.0_scaffold000035CH_atr_471340.000466735
Amborella trichopodaAmTr_v1.0_scaffold000495CH_atr_141570.00000000602385
Amborella trichopodaAmTr_v1.0_scaffold000036CH_atr_471340.000466735
Amborella trichopodaAmTr_v1.0_scaffold000496CH_atr_141570.00000000602385
Solanum lycopersicumSL2.50ch075CH_sly_315440.000000279523
Solanum lycopersicumSL2.50ch076CH_sly_315440.000000279523
Zoysia japonica ssp. nagirizakiZjn_sc00003.15CH_zjn_976370.000000176652
Zoysia japonica ssp. nagirizakiZjn_sc00003.16CH_zjn_976370.000000176652

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
3GOAll GO data.230800.001X
5InterProNo filter applied.230800.001X
6InterProNo filter applied.230800.001V
2GOPrimary GO data only.230800.001V
1GOPrimary GO data only.230800.001X
4GOAll GO data.230800.001V