Functional clusters   top

Information

Type
InterPro domain
Identifier
IPR000743
Description
Glycoside hydrolase, family 28

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodaAmTr_v1.0_scaffold001045CH_atr_468340.000434185
Amborella trichopodaAmTr_v1.0_scaffold001046CH_atr_468340.000434185
Ananas comosusLG195CH_aco_166330.000136685
Ananas comosusLG196CH_aco_166330.000136685
Arabidopsis thalianaChr15CH_ath_539350.00058897
Arabidopsis thalianaChr25CH_ath_216450.000000270164
Arabidopsis thalianaChr25CH_ath_540350.00058897
Arabidopsis thalianaChr35CH_ath_217450.000000270164
Arabidopsis thalianaChr45CH_ath_370330.0000589798
Arabidopsis thalianaChr16CH_ath_539350.00058897
Arabidopsis thalianaChr26CH_ath_540350.00058897
Arabidopsis thalianaChr26CH_ath_216450.000000270164
Arabidopsis thalianaChr36CH_ath_217450.000000270164
Arabidopsis thalianaChr46CH_ath_370330.0000589798
Brachypodium distachyonBd15CH_bdi_528350.000542637
Brachypodium distachyonBd15CH_bdi_355330.0000543572
Brachypodium distachyonBd25CH_bdi_167440.000000060219
Brachypodium distachyonBd16CH_bdi_355330.0000543572
Brachypodium distachyonBd16CH_bdi_528350.000542637
Brachypodium distachyonBd26CH_bdi_167440.000000060219
Elaeis guineensisNC_025994.15CH_egu_64570.00000000764221
Elaeis guineensisNC_026006.15CH_egu_150460.00000335193
Elaeis guineensisNC_025994.16CH_egu_64570.00000000764221
Elaeis guineensisNC_026006.16CH_egu_150460.00000335193
Marchantia polymorphascaffold_1605CH_mpo_41440.000000000282942
Marchantia polymorphascaffold_1606CH_mpo_41440.000000000282942
Oryza brachyantha75CH_obr_251470.0000030293
Oryza brachyantha76CH_obr_251470.0000030293
Oryza sativa ssp. indicaChr75CH_osaindica_294460.000000627373
Oryza sativa ssp. indicaChr76CH_osaindica_294460.000000627373
Oryza sativa ssp. japonicaChr65CH_osa_655340.000191192
Oryza sativa ssp. japonicaChr75CH_osa_386470.0000016628
Oryza sativa ssp. japonicaChr66CH_osa_655340.000191192
Oryza sativa ssp. japonicaChr76CH_osa_386470.0000016628
Phyllostachys edulisPH010002975CH_ped_30330.0000168744
Phyllostachys edulisPH010002976CH_ped_30330.0000168744
Populus trichocarpaChr075CH_ptr_4245130.0000012389
Populus trichocarpaChr175CH_ptr_5412365.57127e-20
Populus trichocarpaChr195CH_ptr_255560.00000000583805
Populus trichocarpaChr076CH_ptr_4245130.0000012389
Populus trichocarpaChr176CH_ptr_5412365.57127e-20
Populus trichocarpaChr196CH_ptr_255560.00000000583805
Setaria italicascaffold_45CH_sit_765350.000668078
Setaria italicascaffold_95CH_sit_764350.000668078
Setaria italicascaffold_46CH_sit_765350.000668078
Setaria italicascaffold_96CH_sit_764350.000668078
Solanum lycopersicumSL2.50ch025CH_sly_614330.000137934
Solanum lycopersicumSL2.50ch125CH_sly_1806120.000000000424704
Solanum lycopersicumSL2.50ch125CH_sly_615330.000137934
Solanum lycopersicumSL2.50ch026CH_sly_614330.000137934
Solanum lycopersicumSL2.50ch126CH_sly_615330.000137934
Solanum lycopersicumSL2.50ch126CH_sly_1806120.000000000424704
Sorghum bicolorChr015CH_sbi_686360.00086903
Sorghum bicolorChr105CH_sbi_460330.0000435559
Sorghum bicolorChr016CH_sbi_686360.00086903
Sorghum bicolorChr106CH_sbi_460330.0000435559
Vitis viniferachr135CH_vvi_369450.00000343906
Vitis viniferachr85CH_vvi_307440.000000689034
Vitis viniferachr95CH_vvi_368450.00000343906
Vitis viniferachr136CH_vvi_369450.00000343906
Vitis viniferachr86CH_vvi_307440.000000689034
Vitis viniferachr96CH_vvi_368450.00000343906
Zea mays65CH_zma_89116.10072e-21
Zea mays66CH_zma_89116.10072e-21

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
3GOAll GO data.230800.001X
5InterProNo filter applied.230800.001X
6InterProNo filter applied.230800.001V
2GOPrimary GO data only.230800.001V
1GOPrimary GO data only.230800.001X
4GOAll GO data.230800.001V