Functional clusters
Information
- Type
- GO term
- Identifier
- GO:0098755
- Description
- maintenance of seed dormancy by absisic acid
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Arabidopsis thaliana | Chr5 | 3 | CH_ath_171 | 3 | 3 | 0.000000103419 |
Arabidopsis thaliana | Chr5 | 4 | CH_ath_171 | 3 | 3 | 0.000000103419 |
Oropetium thomaeum | Oropetium_genomic_20141112_004 | 3 | CH_oth_129 | 2 | 2 | 0.000450214 |
Oropetium thomaeum | Oropetium_genomic_20141112_004 | 4 | CH_oth_129 | 2 | 2 | 0.000450214 |
Populus trichocarpa | Chr03 | 3 | CH_ptr_142 | 4 | 4 | 0.000000001029 |
Populus trichocarpa | Chr04 | 3 | CH_ptr_279 | 3 | 3 | 0.00000284547 |
Populus trichocarpa | Chr05 | 3 | CH_ptr_375 | 3 | 6 | 0.0000568589 |
Populus trichocarpa | Chr03 | 4 | CH_ptr_142 | 4 | 4 | 0.000000001029 |
Populus trichocarpa | Chr04 | 4 | CH_ptr_279 | 3 | 3 | 0.00000284547 |
Populus trichocarpa | Chr05 | 4 | CH_ptr_375 | 3 | 6 | 0.0000568589 |
Solanum lycopersicum | SL2.50ch04 | 3 | CH_sly_69 | 5 | 5 | 0.000000000000106235 |
Solanum lycopersicum | SL2.50ch04 | 4 | CH_sly_69 | 5 | 5 | 0.000000000000106235 |
Vitis vinifera | chr10 | 3 | CH_vvi_119 | 5 | 15 | 0.000000000967656 |
Vitis vinifera | chr10 | 4 | CH_vvi_119 | 5 | 15 | 0.000000000967656 |
Functional clusters experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | X |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | X |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | V |
2 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | V |
1 | GO | Primary GO data only. | 2 | 30 | 80 | 0.001 | X |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | V |