PLAZA 4.0 Monocots : Functional Clustering

Functional clusters

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Arabidopsis thaliana	Chr1	3	CH_ath_572	2	3	0.000601633
Arabidopsis thaliana	Chr1	4	CH_ath_572	2	3	0.000601633
Sorghum bicolor	Chr08	3	CH_sbi_433	2	2	0.000880023
Sorghum bicolor	Chr08	4	CH_sbi_433	2	2	0.000880023
Zea mays	10	3	CH_zma_251	3	17	0.000596582
Zea mays	10	4	CH_zma_251	3	17	0.000596582

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
3	GO	All GO data.	2	30	80	0.001	X
5	InterPro	No filter applied.	2	30	80	0.001	X
6	InterPro	No filter applied.	2	30	80	0.001	V
2	GO	Primary GO data only.	2	30	80	0.001	V
1	GO	Primary GO data only.	2	30	80	0.001	X
4	GO	All GO data.	2	30	80	0.001	V