Functional clusters   top

Information

Type
GO term
Identifier
GO:0030246
Description
carbohydrate binding

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopodaAmTr_v1.0_scaffold000121CH_atr_716235.14835e-28
Amborella trichopodaAmTr_v1.0_scaffold000461CH_atr_358110.00000000000156271
Amborella trichopodaAmTr_v1.0_scaffold000122CH_atr_716235.14835e-28
Amborella trichopodaAmTr_v1.0_scaffold000462CH_atr_358110.00000000000156271
Amborella trichopodaAmTr_v1.0_scaffold000463CH_atr_408110.0000000000038509
Amborella trichopodaAmTr_v1.0_scaffold000464CH_atr_408110.0000000000038509
Ananas comosusLG071CH_aco_33560.00000157975
Ananas comosusLG091CH_aco_426140.00000479885
Ananas comosusLG131CH_aco_510150.0000000000000072089
Ananas comosusLG231CH_aco_925150.0005052
Ananas comosusLG072CH_aco_33560.00000157975
Ananas comosusLG092CH_aco_426140.00000479885
Ananas comosusLG132CH_aco_510150.0000000000000072089
Ananas comosusLG232CH_aco_925150.0005052
Ananas comosusLG073CH_aco_52560.00000297987
Ananas comosusLG074CH_aco_52560.00000297987
Arabidopsis thalianaChr11CH_ath_478460.000780307
Arabidopsis thalianaChr11CH_ath_6110430.00000000163545
Arabidopsis thalianaChr21CH_ath_469220.0000000000908699
Arabidopsis thalianaChr31CH_ath_399190.0000000000171124
Arabidopsis thalianaChr31CH_ath_2697310.0000172535
Arabidopsis thalianaChr31CH_ath_225570.00000567885
Arabidopsis thalianaChr31CH_ath_262580.0000150779
Arabidopsis thalianaChr12CH_ath_6110430.00000000163545
Arabidopsis thalianaChr12CH_ath_478460.000780307
Arabidopsis thalianaChr22CH_ath_469220.0000000000908699
Arabidopsis thalianaChr32CH_ath_262580.0000150779
Arabidopsis thalianaChr32CH_ath_399190.0000000000171124
Arabidopsis thalianaChr32CH_ath_2697310.0000172535
Arabidopsis thalianaChr32CH_ath_225570.00000567885
Arabidopsis thalianaChr33CH_ath_3327310.0000186028
Arabidopsis thalianaChr33CH_ath_324580.0000159202
Arabidopsis thalianaChr34CH_ath_3327310.0000186028
Arabidopsis thalianaChr34CH_ath_324580.0000159202
Brachypodium distachyonBd11CH_bdi_114550.00000573429
Brachypodium distachyonBd11CH_bdi_915307.95185e-20
Brachypodium distachyonBd12CH_bdi_915307.95185e-20
Brachypodium distachyonBd12CH_bdi_114550.00000573429
Brachypodium distachyonBd13CH_bdi_1315306.64359e-19
Brachypodium distachyonBd13CH_bdi_166550.0000115415
Brachypodium distachyonBd43CH_bdi_3127330.00052674
Brachypodium distachyonBd14CH_bdi_1315306.64359e-19
Brachypodium distachyonBd14CH_bdi_166550.0000115415
Brachypodium distachyonBd44CH_bdi_3127330.00052674
Elaeis guineensisNC_025993.11CH_egu_49560.00000236789
Elaeis guineensisNC_025993.11CH_egu_596140.00000772662
Elaeis guineensisNC_025996.11CH_egu_411141.27614e-17
Elaeis guineensisNC_025996.11CH_egu_48560.00000236789
Elaeis guineensisNC_026000.11CH_egu_82440.0000580944
Elaeis guineensisNC_026002.11CH_egu_108450.000288873
Elaeis guineensisNC_026004.11CH_egu_81440.0000580944
Elaeis guineensisNC_026005.11CH_egu_83440.0000580944
Elaeis guineensisNC_026007.11CH_egu_140460.000861848
Elaeis guineensisNC_025993.12CH_egu_596140.00000772662
Elaeis guineensisNC_025993.12CH_egu_49560.00000236789
Elaeis guineensisNC_025996.12CH_egu_48560.00000236789
Elaeis guineensisNC_025996.12CH_egu_411141.27614e-17
Elaeis guineensisNC_026000.12CH_egu_82440.0000580944
Elaeis guineensisNC_026002.12CH_egu_108450.000288873
Elaeis guineensisNC_026004.12CH_egu_81440.0000580944
Elaeis guineensisNC_026005.12CH_egu_83440.0000580944
Elaeis guineensisNC_026007.12CH_egu_140460.000861848
Elaeis guineensisNC_025993.13CH_egu_95560.00000486657
Elaeis guineensisNC_025996.13CH_egu_811146.38525e-17
Elaeis guineensisNC_025996.13CH_egu_94560.00000486657
Elaeis guineensisNC_026000.13CH_egu_139440.000103291
Elaeis guineensisNC_026002.13CH_egu_187450.000513167
Elaeis guineensisNC_026004.13CH_egu_138440.000103291
Elaeis guineensisNC_025993.14CH_egu_95560.00000486657
Elaeis guineensisNC_025996.14CH_egu_811146.38525e-17
Elaeis guineensisNC_025996.14CH_egu_94560.00000486657
Elaeis guineensisNC_026000.14CH_egu_139440.000103291
Elaeis guineensisNC_026002.14CH_egu_187450.000513167
Elaeis guineensisNC_026004.14CH_egu_138440.000103291
Marchantia polymorphascaffold_271CH_mpo_227110.000000000346943
Marchantia polymorphascaffold_272CH_mpo_227110.000000000346943
Marchantia polymorphascaffold_273CH_mpo_1212310.00000000000000395243
Marchantia polymorphascaffold_274CH_mpo_1212310.00000000000000395243
Musa acuminatachr11CH_mac_92440.0000429416
Musa acuminatachr81CH_mac_1375120.000189019
Musa acuminatachr91CH_mac_311136.23244e-19
Musa acuminatachr91CH_mac_91440.0000429416
Musa acuminatachr12CH_mac_92440.0000429416
Musa acuminatachr82CH_mac_1375120.000189019
Musa acuminatachr92CH_mac_311136.23244e-19
Musa acuminatachr92CH_mac_91440.0000429416
Musa acuminatachr13CH_mac_134440.0000765814
Musa acuminatachr83CH_mac_1967400.000343148
Musa acuminatachr93CH_mac_133440.0000765814
Musa acuminatachr93CH_mac_411133.12921e-18
Musa acuminatachr14CH_mac_134440.0000765814
Musa acuminatachr84CH_mac_1967400.000343148
Musa acuminatachr94CH_mac_133440.0000765814
Musa acuminatachr94CH_mac_411133.12921e-18
Oryza brachyantha41CH_obr_1276140.0000148656
Oryza brachyantha71CH_obr_369200.000000000303692
Oryza brachyantha42CH_obr_1276140.0000148656
Oryza brachyantha72CH_obr_369200.000000000303692
Oryza brachyantha43CH_obr_1726140.0000308037
Oryza brachyantha73CH_obr_499200.000000000912048
Oryza brachyantha44CH_obr_1726140.0000308037
Oryza brachyantha74CH_obr_499200.000000000912048
Oryza sativa ssp. indicaChr71CH_osaindica_2511210.0000000000000100434
Oryza sativa ssp. indicaChr72CH_osaindica_2511210.0000000000000100434
Oryza sativa ssp. indicaChr73CH_osaindica_3411210.0000000000000376901
Oryza sativa ssp. indicaChr74CH_osaindica_3411210.0000000000000376901
Oryza sativa ssp. japonicaChr71CH_osa_420302.48133e-29
Oryza sativa ssp. japonicaChr81CH_osa_4211160.00000000000000856411
Oryza sativa ssp. japonicaChr72CH_osa_420302.48133e-29
Oryza sativa ssp. japonicaChr82CH_osa_4211160.00000000000000856411
Oryza sativa ssp. japonicaChr73CH_osa_920301.19061e-28
Oryza sativa ssp. japonicaChr83CH_osa_5511160.0000000000000201057
Oryza sativa ssp. japonicaChr74CH_osa_920301.19061e-28
Oryza sativa ssp. japonicaChr84CH_osa_5511160.0000000000000201057
Populus trichocarpaChr011CH_ptr_3425110.000384314
Populus trichocarpaChr021CH_ptr_288440.000118879
Populus trichocarpaChr071CH_ptr_289440.000118879
Populus trichocarpaChr091CH_ptr_998130.000000000402842
Populus trichocarpaChr012CH_ptr_3425110.000384314
Populus trichocarpaChr022CH_ptr_288440.000118879
Populus trichocarpaChr072CH_ptr_289440.000118879
Populus trichocarpaChr092CH_ptr_998130.000000000402842
Populus trichocarpaChr013CH_ptr_5185110.000613931
Populus trichocarpaChr023CH_ptr_431440.000173323
Populus trichocarpaChr014CH_ptr_5185110.000613931
Populus trichocarpaChr024CH_ptr_431440.000173323
Setaria italicascaffold_21CH_sit_46880.000000000000879799
Setaria italicascaffold_21CH_sit_277440.000178935
Setaria italicascaffold_22CH_sit_46880.000000000000879799
Setaria italicascaffold_22CH_sit_277440.000178935
Setaria italicascaffold_23CH_sit_68880.00000000000265465
Setaria italicascaffold_23CH_sit_404440.000309718
Setaria italicascaffold_24CH_sit_68880.00000000000265465
Setaria italicascaffold_24CH_sit_404440.000309718
Solanum lycopersicumSL2.50ch041CH_sly_239440.0000187989
Solanum lycopersicumSL2.50ch111CH_sly_90660.000000000421951
Solanum lycopersicumSL2.50ch042CH_sly_239440.0000187989
Solanum lycopersicumSL2.50ch112CH_sly_90660.000000000421951
Solanum lycopersicumSL2.50ch043CH_sly_318440.0000363372
Solanum lycopersicumSL2.50ch113CH_sly_125660.00000000114023
Solanum lycopersicumSL2.50ch044CH_sly_318440.0000363372
Solanum lycopersicumSL2.50ch114CH_sly_125660.00000000114023
Sorghum bicolorChr021CH_sbi_302450.000642222
Sorghum bicolorChr021CH_sbi_1179360.000000276103
Sorghum bicolorChr101CH_sbi_301450.000642222
Sorghum bicolorChr022CH_sbi_302450.000642222
Sorghum bicolorChr022CH_sbi_1179360.000000276103
Sorghum bicolorChr102CH_sbi_301450.000642222
Sorghum bicolorChr023CH_sbi_1779360.000000871847
Sorghum bicolorChr024CH_sbi_1779360.000000871847
Spirodela polyrhizapseudo21CH_spo_85440.000030787
Spirodela polyrhizapseudo211CH_spo_58550.000000189869
Spirodela polyrhizapseudo91CH_spo_427110.00000000227566
Spirodela polyrhizapseudo22CH_spo_85440.000030787
Spirodela polyrhizapseudo212CH_spo_58550.000000189869
Spirodela polyrhizapseudo92CH_spo_427110.00000000227566
Spirodela polyrhizapseudo213CH_spo_79550.000000447439
Spirodela polyrhizapseudo214CH_spo_79550.000000447439
Vitis viniferachr31CH_vvi_1217150.0000000863073
Vitis viniferachrUn1CH_vvi_298460.000757053
Vitis viniferachr32CH_vvi_1217150.0000000863073
Vitis viniferachrUn2CH_vvi_298460.000757053
Vitis viniferachr33CH_vvi_1737150.000000205536
Vitis viniferachr34CH_vvi_1737150.000000205536
Zea mays61CH_zma_57550.000000200685
Zea mays62CH_zma_57550.000000200685

Available child term results

GO term Description Number of clusters
GO:0005534galactose binding2
GO:0005536glucose binding2
GO:0030247polysaccharide binding278
GO:0030248cellulose binding4
GO:0031418L-ascorbic acid binding2
GO:2001070starch binding4

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
3GOAll GO data.230800.001X
5InterProNo filter applied.230800.001X
6InterProNo filter applied.230800.001V
2GOPrimary GO data only.230800.001V
1GOPrimary GO data only.230800.001X
4GOAll GO data.230800.001V