Functional clusters   top

Information

Type
GO term
Identifier
GO:0015031
Description
protein transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brachypodium distachyonBd11CH_bdi_231330.000824536
Brachypodium distachyonBd12CH_bdi_231330.000824536
Oryza sativa ssp. indicaChr31CH_osaindica_267330.000439314
Oryza sativa ssp. indicaChr32CH_osaindica_267330.000439314
Populus trichocarpaChr031CH_ptr_346480.00045898
Populus trichocarpaChr032CH_ptr_346480.00045898
Setaria italicascaffold_91CH_sit_212460.0000343531
Setaria italicascaffold_92CH_sit_212460.0000343531
Sorghum bicolorChr013CH_sbi_4485110.000966349
Sorghum bicolorChr014CH_sbi_4485110.000966349
Vitis viniferachr51CH_vvi_313330.000985587
Vitis viniferachr52CH_vvi_313330.000985587
Zea mays91CH_zma_90440.00000644352
Zea mays92CH_zma_90440.00000644352
Zea mays93CH_zma_223440.000339337
Zea mays94CH_zma_223440.000339337

Available child term results

GO term Description Number of clusters
GO:0000055ribosomal large subunit export from nucleus14
GO:0006406mRNA export from nucleus2
GO:0006627protein processing involved in protein targeting to mitochondrion12
GO:0016560protein import into peroxisome matrix, docking4
GO:0016973poly(A)+ mRNA export from nucleus2
GO:0045036protein targeting to chloroplast2
GO:0045037protein import into chloroplast stroma10
GO:0045040protein import into mitochondrial outer membrane6
GO:1904216positive regulation of protein import into chloroplast stroma2

Functional clusters experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
3GOAll GO data.230800.001X
5InterProNo filter applied.230800.001X
6InterProNo filter applied.230800.001V
2GOPrimary GO data only.230800.001V
1GOPrimary GO data only.230800.001X
4GOAll GO data.230800.001V