PLAZA 4.0 Monocots : Functional Clustering

Functional clusters

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Oryza sativa ssp. japonica	Chr6	3	CH_osa_397	5	7	0.00018934
Oryza sativa ssp. japonica	Chr6	4	CH_osa_397	5	7	0.00018934

GO term	Description	Number of clusters
GO:0005769	early endosome	2
GO:0031303	integral component of endosome membrane	2
GO:0031313	extrinsic component of endosome membrane	12

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
3	GO	All GO data.	2	30	80	0.001	X
5	InterPro	No filter applied.	2	30	80	0.001	X
6	InterPro	No filter applied.	2	30	80	0.001	V
2	GO	Primary GO data only.	2	30	80	0.001	V
1	GO	Primary GO data only.	2	30	80	0.001	X
4	GO	All GO data.	2	30	80	0.001	V