PLAZA 4.0 Monocots : Functional Clustering

Functional clusters

Species	Chromosome	Experiment	Cluster id	Cluster size	Number of genes	E-value
Oryza sativa ssp. japonica	Chr1	1	CH_osa_415	3	3	0.000923053
Oryza sativa ssp. japonica	Chr1	2	CH_osa_415	3	3	0.000923053
Setaria italica	scaffold_8	3	CH_sit_437	4	15	0.000469748
Setaria italica	scaffold_8	4	CH_sit_437	4	15	0.000469748

GO term	Description	Number of clusters
GO:0032588	trans-Golgi network membrane	2

Exp id	Data type	Data filter	Min genes cluster	Max genes cluster	Max cluster size	E-value	Tandems removal
3	GO	All GO data.	2	30	80	0.001	X
5	InterPro	No filter applied.	2	30	80	0.001	X
6	InterPro	No filter applied.	2	30	80	0.001	V
2	GO	Primary GO data only.	2	30	80	0.001	V
1	GO	Primary GO data only.	2	30	80	0.001	X
4	GO	All GO data.	2	30	80	0.001	V