Multiplicon view: 4582 (Experiment Id: 1)   top

The Multiplicon view displays the aligned gene strings of a set of homologous segments.

Multiplicon Information

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
4582 10 10 5 33

Multiplicon Plot


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Gene Information

Gene Family Information

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Draw mode Segment ordering Species

Species Chromosome First Gene Last Gene
Brachypodium distachyon Bd1 Bradi1g15581 Bradi1g15486
Oropetium thomaeum Oropetium_genomic_20141112_073 Oropetium_20150105_24532 Oropetium_20150105_24545
Oryza brachyantha 3 OB03G32840 OB03G33000
Oryza sativa ssp. indica Chr3 OsR498G0306440100.01 OsR498G0306453400.01
Oryza sativa ssp. japonica Chr3 LOC_Os03g38210 LOC_Os03g38590
Setaria italica scaffold_9 Seita.9G181600 Seita.9G179700
Sorghum bicolor Chr01 Sobic.001G183100 Sobic.001G180800
Vitis vinifera chr12 GSVIVG01030609001 GSVIVG01030566001
Zea mays 1 Zm00001d033075 Zm00001d033090
Zoysia japonica ssp. nagirizaki Zjn_sc00019.1 Zjn_sc00019.1.g00260.1.am.mk Zjn_sc00019.1.g00420.1.sm.mkhc

This multiplicon is a higher level multiplicon, indicating that it contains more segments than it's parental multiplicon.
To explore the parental multiplicon, view the multiplicon in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
4581 9 9 10 37

This multiplicon is not redundant, but is the parent of one or more redundant multiplicons.
To explore these redundant reduced colinear regions, view the redundant multiplicon(s) in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
129620 2 2 5 22
131438 2 2 5 22
137018 2 2 5 39
140564 2 2 5 37
143194 2 2 5 36