Multiplicon view: 19645 (Experiment Id: 1)   top

The Multiplicon view displays the aligned gene strings of a set of homologous segments.

Multiplicon Information

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
19645 6 6 7 22

Multiplicon Plot


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Gene Information

Gene Family Information

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Draw mode Segment ordering Species

Species Chromosome First Gene Last Gene
Arabidopsis thaliana Chr1 AT1G80140 AT1G80240
Oryza brachyantha 1 OB01G14560 OB01G14700
Oryza sativa ssp. indica Chr1 OsR498G0100243500.01 OsR498G0100251200.01
Solanum lycopersicum SL2.50ch06 Solyc06g068040.2 Solyc06g067910.2
Zea mays 3 Zm00001d039668 Zm00001d039648
Zostera marina scaffold_9 Zosma9g00850 Zosma9g00950

This multiplicon is a higher level multiplicon, indicating that it contains more segments than it's parental multiplicon.
To explore the parental multiplicon, view the multiplicon in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
19644 5 5 8 31

This multiplicon is not redundant, but is the parent of one or more redundant multiplicons.
To explore these redundant reduced colinear regions, view the redundant multiplicon(s) in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
93641 2 2 7 38
97534 2 2 7 50