Multiplicon view: 12795 (Experiment Id: 1)   top

The Multiplicon view displays the aligned gene strings of a set of homologous segments.

Multiplicon Information

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
12795 8 9 12 63

Multiplicon Plot


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Gene Information

Gene Family Information

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Draw mode Segment ordering Species

Species Chromosome First Gene Last Gene
Oryza brachyantha 1 OB01G47650 OB01G48000
Oryza sativa ssp. indica Chr12 OsR498G1221033500.01 OsR498G1221047500.01
Oryza sativa ssp. japonica Chr1 LOC_Os01g65330 LOC_Os01g65660
Phyllostachys edulis PH01000066 PH01000066G1270 PH01000066G0340
Sorghum bicolor Chr03 Sobic.003G372800 Sobic.003G375900
Spirodela polyrhiza pseudo4 Spipo4G0102600 Spipo4G0097700
Zea mays 3 Zm00001d042669 Zm00001d042637
Zea mays 8 Zm00001d012257 Zm00001d012229
Zoysia japonica ssp. nagirizaki Zjn_sc00034.1 Zjn_sc00034.1.g05530.1.am.mk Zjn_sc00034.1.g05230.1.am.mk

This multiplicon is a higher level multiplicon, indicating that it contains more segments than it's parental multiplicon.
To explore the parental multiplicon, view the multiplicon in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
12792 7 8 6 57

This multiplicon is a lower level multiplicon with child multiplicons, indicating that there are multiplicons with more colinear segments in the same genomic region.
To explore the child multiplicons, view the multiplicon in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
12796 8 10 9 73

This multiplicon is not redundant, but is the parent of one or more redundant multiplicons.
To explore these redundant reduced colinear regions, view the redundant multiplicon(s) in the table below.

Multiplicon Id #Species #Segments #Anchorpoints Profile Length
39104 2 2 21 102