Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Gene Family E-value Bitscore Alignment Length Identity Percentage
PH01000856G0300 Phyllostachys edulis HOM04M000466 5.3e-287 988.4 512 100.0
TAE52045G001 Triticum aestivum HOM04M000466 4.4e-249 862.4 518 87.6
TAE33100G002 Triticum aestivum HOM04M000466 8.2e-248 858.2 516 87.2
LOC_Os05g34650 Oryza sativa ssp. japonica HOM04M000466 6.3e-240 832.0 466 92.5
OsR498G0510858000.01 Oryza sativa ssp. indica HOM04M000466 6.3e-240 832.0 466 92.5
Zm00001d038209 Zea mays HOM04M000466 1.5e-233 810.8 522 83.1
Sobic.009G140800 Sorghum bicolor HOM04M000466 2.2e-232 807.0 462 89.6
Seita.3G238400 Setaria italica HOM04M000466 4.8e-232 805.8 462 89.4
Oropetium_20150105_05068 Oropetium thomaeum HOM04M000466 1.5e-228 794.3 514 81.5
LOC_Os01g66350 Oryza sativa ssp. japonica HOM04M000466 1.4e-226 787.7 514 79.6
OsR498G0102478500.01 Oryza sativa ssp. indica HOM04M000466 1.8e-226 787.3 514 79.4
OB05G24710 Oryza brachyantha HOM04M000466 2.6e-225 783.5 418 95.7
Sobic.003G381700 Sorghum bicolor HOM04M000466 4.4e-225 782.7 518 78.6
Bradi2g57250 Brachypodium distachyon HOM04M000466 1.0e-221 771.5 510 78.6
Zm00001d042585 Zea mays HOM04M000466 3.6e-219 763.1 545 74.9
TAE35295G001 Triticum aestivum HOM04M000466 5.2e-218 759.2 515 77.9
TAE46452G002 Triticum aestivum HOM04M000466 9.2e-215 748.4 493 79.3
TAE13200G001 Triticum aestivum HOM04M000466 1.2e-209 731.5 510 75.9
PH01002996G0240 Phyllostachys edulis HOM04M000466 1.1e-204 714.9 512 76.0
Zm00001d010243 Zea mays HOM04M000466 7.5e-201 702.2 460 81.3
OB01G48550 Oryza brachyantha HOM04M000466 3.2e-199 696.8 398 87.2
HVU0038G2035 Hordeum vulgare HOM04M000466 7.3e-196 685.6 398 85.7
Seita.5G407100 Setaria italica HOM04M000466 9.5e-196 685.3 400 86.0
MAC01G1600 Musa acuminata HOM04M000466 1.1e-194 681.8 536 69.6
PH01000071G0710 Phyllostachys edulis HOM04M000466 8.9e-194 678.7 562 67.3
PH01000141G0910 Phyllostachys edulis HOM04M000466 2.6e-193 677.2 492 74.4
EGU1685G0818 Elaeis guineensis HOM04M000466 3.2e-191 670.2 484 71.9
Oropetium_20150105_13029 Oropetium thomaeum HOM04M000466 9.2e-191 668.7 491 72.9
Zjn_sc00009.1.g04120.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 1.5e-188 661.4 489 72.2
Bradi2g25097 Brachypodium distachyon HOM04M000466 7.6e-185 649.0 396 87.9
Aco011345 Ananas comosus HOM04M000466 7.8e-182 639.0 513 66.9
EGU1634G0796 Elaeis guineensis HOM04M000466 3.0e-181 637.1 517 66.0
MAC03G0097 Musa acuminata HOM04M000466 1.1e-178 628.6 531 65.0
ATR1089G008 Amborella trichopoda HOM04M000466 4.9e-176 619.8 524 63.4
GSVIVG01023138001 Vitis vinifera HOM04M000466 1.0e-173 612.1 516 63.6
Potri.004G229500 Populus trichocarpa HOM04M000466 4.3e-172 606.7 454 69.2
Spipo4G0080700 Spirodela polyrhiza HOM04M000466 3.4e-169 597.0 456 69.3
AT5G49820 Arabidopsis thaliana HOM04M000466 6.4e-168 592.8 504 63.5
Solyc10g008560.2 Solanum lycopersicum HOM04M000466 8.4e-168 592.4 506 62.3
Zosma105g00490 Zostera marina HOM04M000466 1.4e-167 591.7 506 63.2
PEQU_06845 Phalaenopsis equestris HOM04M000466 3.2e-159 563.9 408 69.9
HVU0036G1292 Hordeum vulgare HOM04M000466 1.5e-148 528.5 299 91.0
Pp3c5_3000 Physcomitrella patens HOM04M000466 1.6e-129 465.3 452 50.7
TAE14914G001 Triticum aestivum HOM04M000466 8.0e-126 453.0 290 85.9
Zjn_sc00025.1.g02090.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 1.0e-125 452.6 466 57.7
Mapoly0083s0024 Marchantia polymorpha HOM04M000466 1.1e-122 442.6 454 51.1
SMO351G0153 Selaginella moellendorffii HOM04M000466 7.0e-114 413.3 461 47.9
Zjn_sc00034.1.g04840.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 5.2e-101 370.5 428 54.2
Pp3c6_25980 Physcomitrella patens HOM04M000466 2.2e-99 365.2 316 57.3
Zjn_sc00012.1.g04440.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 2.7e-97 358.2 514 48.2
Zm00001d012198 Zea mays HOM04M000466 1.1e-93 346.3 509 44.6
PAB00014672 Picea abies HOM04M000466 2.3e-80 302.0 262 60.7
Cre12.g560250 Chlamydomonas reinhardtii HOM04M000466 2.1e-78 295.4 334 44.9
PAB00008369 Picea abies HOM04M000466 7.1e-74 280.4 304 50.7
LOC_Os04g22360 Oryza sativa ssp. japonica HOM04M000466 1.6e-38 162.9 391 29.4
GSVIVG01020479001 Vitis vinifera HOM04M000466 2.2e-38 162.5 399 29.3
PEQU_25679 Phalaenopsis equestris HOM04M000466 2.8e-38 162.2 346 30.1
Bradi5g05170 Brachypodium distachyon HOM04M000466 1.1e-37 160.2 422 26.3
AT2G31190 Arabidopsis thaliana HOM04M000466 5.3e-37 157.9 320 31.9
Spipo11G0001200 Spirodela polyrhiza HOM04M000466 5.3e-37 157.9 342 29.2
Sobic.003G402800 Sorghum bicolor HOM04M000466 6.9e-37 157.5 411 25.3
Solyc08g005570.2 Solanum lycopersicum HOM04M000466 6.9e-37 157.5 335 29.0
Oropetium_20150105_08986 Oropetium thomaeum HOM04M000466 6.9e-37 157.5 467 25.5
SMO118G0437 Selaginella moellendorffii HOM04M000466 6.9e-37 157.5 342 30.4
Potri.001G193300 Populus trichocarpa HOM04M000466 6.9e-37 157.5 421 26.6
Pp3c16_18490 Physcomitrella patens HOM04M000466 6.9e-37 157.5 330 30.3
Zm00001d042355 Zea mays HOM04M000466 1.5e-36 156.4 410 25.6
Seita.7G043400 Setaria italica HOM04M000466 1.5e-36 156.4 389 27.8
TAE35522G001 Triticum aestivum HOM04M000466 3.4e-36 155.2 333 28.5
OB04G15170 Oryza brachyantha HOM04M000466 4.5e-36 154.8 403 26.6
ATR0568G152 Amborella trichopoda HOM04M000466 5.9e-36 154.5 418 27.0
Sobic.006G148100 Sorghum bicolor HOM04M000466 1.3e-35 153.3 335 30.7
Spipo2G0117100 Spirodela polyrhiza HOM04M000466 2.2e-35 152.5 399 28.1
SMO364G0160 Selaginella moellendorffii HOM04M000466 2.2e-35 152.5 329 30.4
MAC09G0467 Musa acuminata HOM04M000466 3.8e-35 151.8 330 29.4
TAE14851G001 Triticum aestivum HOM04M000466 3.8e-35 151.8 333 28.2
TAE25003G002 Triticum aestivum HOM04M000466 1.1e-34 150.2 315 32.1
TAE29969G003 Triticum aestivum HOM04M000466 1.1e-34 150.2 316 32.0
Mapoly0015s0205 Marchantia polymorpha HOM04M000466 1.4e-34 149.8 332 26.5
Zosma76g00910 Zostera marina HOM04M000466 1.4e-34 149.8 409 25.9
EGU0206G0672 Elaeis guineensis HOM04M000466 1.9e-34 149.4 329 30.1
ATR0810G079 Amborella trichopoda HOM04M000466 1.9e-34 149.4 396 27.0
AT2G23470 Arabidopsis thaliana HOM04M000466 2.5e-34 149.1 395 27.1
Seita.7G167400 Setaria italica HOM04M000466 4.2e-34 148.3 371 29.9
Spipo1G0004100 Spirodela polyrhiza HOM04M000466 5.5e-34 147.9 294 31.3
Potri.005G224000 Populus trichocarpa HOM04M000466 7.2e-34 147.5 350 30.9
TAE09986G003 Triticum aestivum HOM04M000466 9.4e-34 147.1 315 31.4
Zm00001d003066 Zea mays HOM04M000466 2.1e-33 146.0 327 30.3
PH01000522G0480 Phyllostachys edulis HOM04M000466 2.1e-33 146.0 329 28.6
ATR0736G118 Amborella trichopoda HOM04M000466 2.1e-33 146.0 290 29.7
Mapoly0003s0225 Marchantia polymorpha HOM04M000466 2.1e-33 146.0 231 33.3
Aco003930 Ananas comosus HOM04M000466 2.7e-33 145.6 447 26.6
Pp3c13_23590 Physcomitrella patens HOM04M000466 2.7e-33 145.6 304 29.6
Bradi5g15767 Brachypodium distachyon HOM04M000466 3.6e-33 145.2 345 29.9
HVU0037G1429 Hordeum vulgare HOM04M000466 3.6e-33 145.2 315 31.4
AT1G13770 Arabidopsis thaliana HOM04M000466 4.6e-33 144.8 334 29.0
Solyc05g026140.2 Solanum lycopersicum HOM04M000466 7.9e-33 144.1 356 28.7
Zosma88g00630 Zostera marina HOM04M000466 1.0e-32 143.7 305 30.2
AT3G45890 Arabidopsis thaliana HOM04M000466 1.0e-32 143.7 361 26.6
GSVIVG01032490001 Vitis vinifera HOM04M000466 1.0e-32 143.7 331 28.1
Pp3c17_20490 Physcomitrella patens HOM04M000466 1.4e-32 143.3 331 30.2
Mapoly0141s0001 Marchantia polymorpha HOM04M000466 1.8e-32 142.9 348 27.3
Aco003898 Ananas comosus HOM04M000466 8.8e-32 140.6 423 26.0
GSVIVG01028326001 Vitis vinifera HOM04M000466 8.8e-32 140.6 331 29.6
OB03G18610 Oryza brachyantha HOM04M000466 1.1e-31 140.2 330 28.5
Solyc02g065360.2 Solanum lycopersicum HOM04M000466 1.5e-31 139.8 344 27.9
Potri.007G035300 Populus trichocarpa HOM04M000466 2.0e-31 139.4 249 32.5
MCO14G292 Micromonas commoda HOM04M000466 2.5e-31 139.0 243 33.3
OB04G25870 Oryza brachyantha HOM04M000466 2.5e-31 139.0 367 30.2
Sobic.001G457300 Sorghum bicolor HOM04M000466 3.3e-31 138.7 341 28.2
Pp3c18_1727 Physcomitrella patens HOM04M000466 5.7e-31 137.9 426 25.8
Pp3c18_1720 Physcomitrella patens HOM04M000466 5.7e-31 137.9 426 25.8
OsR498G0408901000.01 Oryza sativa ssp. indica HOM04M000466 5.7e-31 137.9 359 29.2
LOC_Os04g43690 Oryza sativa ssp. japonica HOM04M000466 5.7e-31 137.9 359 29.2
Zosma116g00600 Zostera marina HOM04M000466 7.4e-31 137.5 339 27.7
Oropetium_20150105_12113 Oropetium thomaeum HOM04M000466 7.4e-31 137.5 340 29.1
PAB00009515 Picea abies HOM04M000466 7.4e-31 137.5 185 44.3
Bradi1g70040 Brachypodium distachyon HOM04M000466 9.7e-31 137.1 330 28.5
Spipo24G0010700 Spirodela polyrhiza HOM04M000466 9.7e-31 137.1 447 25.5
TAE29975G002 Triticum aestivum HOM04M000466 1.3e-30 136.7 394 27.9
TAE04178G003 Triticum aestivum HOM04M000466 2.8e-30 135.6 393 27.2
TAE44597G001 Triticum aestivum HOM04M000466 4.8e-30 134.8 241 31.5
TAE04062G001 Triticum aestivum HOM04M000466 6.3e-30 134.4 388 27.8
EGU2755G0469 Elaeis guineensis HOM04M000466 8.2e-30 134.0 340 27.9
GSVIVG01012218001 Vitis vinifera HOM04M000466 1.4e-29 133.3 407 24.3
PAB00046603 Picea abies HOM04M000466 1.4e-29 133.3 97 67.0
Seita.9G491700 Setaria italica HOM04M000466 1.4e-29 133.3 323 27.6
EGU1820G0001 Elaeis guineensis HOM04M000466 2.4e-29 132.5 393 25.2
Mapoly0001s0066 Marchantia polymorpha HOM04M000466 3.1e-29 132.1 249 29.3
Solyc05g012290.2 Solanum lycopersicum HOM04M000466 6.9e-29 131.0 245 31.0
ATR0907G009 Amborella trichopoda HOM04M000466 1.2e-28 130.2 390 26.2
Aco021847 Ananas comosus HOM04M000466 4.5e-28 128.3 240 30.0
AT5G01510 Arabidopsis thaliana HOM04M000466 1.3e-27 126.7 338 30.8
PH01000557G0680 Phyllostachys edulis HOM04M000466 2.2e-27 125.9 269 29.4
SMO343G0031 Selaginella moellendorffii HOM04M000466 2.9e-27 125.6 239 28.5
OB01G12650 Oryza brachyantha HOM04M000466 2.9e-27 125.6 331 29.0
Bradi2g02740 Brachypodium distachyon HOM04M000466 2.9e-27 125.6 408 27.0
Potri.008G095700 Populus trichocarpa HOM04M000466 3.8e-27 125.2 332 25.6
Solyc09g005230.2 Solanum lycopersicum HOM04M000466 5.0e-27 124.8 330 28.2
Mapoly0076s0023 Marchantia polymorpha HOM04M000466 1.4e-26 123.2 349 27.8
LOC_Os03g11500 Oryza sativa ssp. japonica HOM04M000466 1.2e-25 120.2 226 31.4
Seita.5G097200 Setaria italica HOM04M000466 6.1e-25 117.9 356 27.5
PH01000742G0190 Phyllostachys edulis HOM04M000003 1.4e-24 116.7 96 64.6
Cre09.g396050 Chlamydomonas reinhardtii HOM04M000466 1.8e-24 116.3 287 28.6
TAE40637G002 Triticum aestivum HOM04M000466 1.8e-24 116.3 403 26.3
TAE57017G001 Triticum aestivum HOM04M000466 5.1e-24 114.8 403 26.3
Zosma27g00960 Zostera marina HOM04M000466 5.1e-24 114.8 336 27.4
TAE24735G003 Triticum aestivum HOM04M000466 1.5e-23 113.2 423 26.2
Cre03.g187650 Chlamydomonas reinhardtii HOM04M000466 3.3e-23 112.1 333 24.9
MAC02G2185 Musa acuminata HOM04M000466 5.7e-23 111.3 338 28.4
Zjn_sc00006.1.g07360.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 7.4e-23 110.9 208 30.8
Aco008057 Ananas comosus HOM04M000466 2.2e-22 109.4 348 26.4
Zm00001d003067 Zea mays HOM04M000466 2.2e-22 109.4 214 31.3
Cre16.g671150 Chlamydomonas reinhardtii HOM04M000466 2.8e-22 109.0 184 32.1
ATR0618G035 Amborella trichopoda HOM04M000466 4.8e-22 108.2 288 29.9
PH01000531G0510 Phyllostachys edulis HOM04M000466 6.3e-22 107.8 223 29.6
EGU1528G0001 Elaeis guineensis HOM04M000466 2.4e-21 105.9 257 28.0
SMO367G1276 Selaginella moellendorffii HOM04M000466 2.4e-21 105.9 322 25.8
Spipo22G0045100 Spirodela polyrhiza HOM04M000466 7.0e-21 104.4 199 35.2
Bradi2g25111 Brachypodium distachyon HOM04M000466 2.0e-20 102.8 49 89.8
SMO367G0699 Selaginella moellendorffii HOM04M000466 7.7e-20 100.9 245 25.7
Potri.006G099700 Populus trichocarpa HOM04M000466 1.3e-19 100.1 199 33.2
LOC_Os01g04860 Oryza sativa ssp. japonica HOM04M000466 1.3e-19 100.1 180 35.0
MCO13G536 Micromonas commoda HOM04M000466 8.5e-19 97.4 216 28.2
Sobic.003G077700 Sorghum bicolor HOM04M000466 1.9e-18 96.3 198 34.8
Cre03.g148150 Chlamydomonas reinhardtii HOM04M000466 2.5e-18 95.9 176 31.2
MAC03G0807 Musa acuminata HOM04M000466 2.7e-17 92.4 128 36.7
Zm00001d039903 Zea mays HOM04M000466 3.0e-16 89.0 289 26.6
GSVIVG01033964001 Vitis vinifera HOM04M000466 3.9e-16 88.6 397 24.4
MCO09G182 Micromonas commoda HOM04M000466 5.7e-15 84.7 415 25.3
PAB00001057 Picea abies HOM04M000466 1.3e-14 83.6 118 38.1
PAB00009516 Picea abies HOM04M000466 1.1e-13 80.5 58 63.8
Zm00001d048092 Zea mays HOM04M000497 2.2e-11 72.8 246 24.8
Zm00001d035466 Zea mays HOM04M000466 6.5e-11 71.2 169 27.8
Potri.002G038632 Populus trichocarpa HOM04M000466 8.5e-11 70.9 106 34.0
PEQU_22315 Phalaenopsis equestris HOM04M000466 1.9e-10 69.7 162 27.8
Oropetium_20150105_07084 Oropetium thomaeum HOM04M000466 7.2e-10 67.8 167 30.5
PAB00061339 Picea abies HOM04M000466 2.1e-09 66.2 98 35.7
Oropetium_20150105_00497 Oropetium thomaeum HOM04M000466 4.7e-09 65.1 167 25.7
HVU0037G3491 Hordeum vulgare HOM04M000466 6.1e-09 64.7 167 25.1
MAC12G0750 Musa acuminata HOM04M000466 2.3e-08 62.8 259 21.2
PAB00039399 Picea abies HOM04M000466 2.3e-08 62.8 45 71.1
Zjn_sc00003.1.g08230.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04M000466 5.2e-08 61.6 221 26.2
OsR498G0407953300.01 Oryza sativa ssp. indica HOM04M000466 6.7e-08 61.2 167 25.1
HVU0262G0095 Hordeum vulgare HOM04M000466 1.3e-06 57.0 123 29.3
PAB00016362 Picea abies HOM04M000466 6.3e-06 54.7 37 59.5

Amborella trichopoda (6 genes)
Ananas comosus (5 genes)
Arabidopsis thaliana (6 genes)
Brachypodium distachyon (7 genes)
Chlamydomonas reinhardtii (5 genes)
Elaeis guineensis (6 genes)
Hordeum vulgare (5 genes)
Marchantia polymorpha (6 genes)
Micromonas commoda (3 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (6 genes)
Oryza brachyantha (6 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (6 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (8 genes)
Physcomitrella patens (7 genes)
Picea abies (9 genes)
Populus trichocarpa (7 genes)
Selaginella moellendorffii (6 genes)
Setaria italica (6 genes)
Solanum lycopersicum (6 genes)
Sorghum bicolor (6 genes)
Spirodela polyrhiza (6 genes)
Triticum aestivum (18 genes)
Vitis vinifera (6 genes)
Zea mays (10 genes)
Zostera marina (5 genes)
Zoysia japonica ssp. nagirizaki (6 genes)