Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Gene Family E-value Bitscore Alignment Length Identity Percentage
OsR498G0204714800.01 Oryza sativa ssp. indica HOM04M000607 2.1e-74 280.4 149 100.0
TAE28686G002 Triticum aestivum HOM04M000607 1.5e-56 221.1 142 82.4
TAE57725G005 Triticum aestivum HOM04M000607 1.4e-54 214.5 142 80.3
Zm00001d051789 Zea mays HOM04M000607 2.6e-53 210.3 144 79.2
Sobic.004G248300 Sorghum bicolor HOM04M000607 3.4e-53 209.9 146 79.5
Zjn_sc00022.1.g02230.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04M000607 3.2e-51 203.4 154 72.1
Zjn_sc00007.1.g05750.1.am.mk Zoysia japonica ssp. nagirizaki HOM04M000607 1.0e-49 198.4 129 78.3
Seita.1G310000 Setaria italica HOM04M000607 1.5e-48 194.5 145 75.9
Bradi3g56877 Brachypodium distachyon HOM04M000607 4.8e-47 189.5 100 93.0
Oropetium_20150105_04107 Oropetium thomaeum HOM04M000607 4.5e-45 183.0 98 89.8
TAE17379G003 Triticum aestivum HOM04M000607 1.0e-44 181.8 140 72.9
Zm00001d017947 Zea mays HOM04M000607 1.8e-41 171.0 143 71.3
EGU2211G0083 Elaeis guineensis HOM04M000607 7.7e-37 155.6 96 79.2
LOC_Os02g50020 Oryza sativa ssp. japonica HOM04M000607 1.1e-35 151.8 89 93.3
EGU1340G0010 Elaeis guineensis HOM04M000607 1.1e-35 151.8 96 77.1
Zjn_sc00006.1.g01470.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04M000607 1.9e-35 151.0 126 66.7
Bradi5g12520 Brachypodium distachyon HOM04M000607 3.2e-35 150.2 124 67.7
Potri.010G108700 Populus trichocarpa HOM04M000607 4.2e-35 149.8 96 79.2
Potri.008G133000 Populus trichocarpa HOM04M000607 7.2e-35 149.1 112 70.5
Zosma32g00800 Zostera marina HOM04M000607 1.2e-34 148.3 96 75.0
GSVIVG01011685001 Vitis vinifera HOM04M000607 1.6e-34 147.9 96 76.0
Zm00001d016977 Zea mays HOM04M000607 2.1e-34 147.5 107 72.0
Oropetium_20150105_02567 Oropetium thomaeum HOM04M000607 3.6e-34 146.7 100 75.0
Zm00001d050905 Zea mays HOM04M000607 4.6e-34 146.4 108 72.2
Oropetium_20150105_22695 Oropetium thomaeum HOM04M000607 4.6e-34 146.4 98 73.5
Seita.1G210200 Setaria italica HOM04M000607 6.1e-34 146.0 130 64.6
ATR0564G375 Amborella trichopoda HOM04M000607 1.4e-33 144.8 108 68.5
Aco002987 Ananas comosus HOM04M000607 1.8e-33 144.4 90 76.7
TAE52966G003 Triticum aestivum HOM04M000607 2.3e-33 144.1 97 77.3
TAE16679G003 Triticum aestivum HOM04M000607 2.3e-33 144.1 97 77.3
TAE07638G002 Triticum aestivum HOM04M000607 2.3e-33 144.1 97 77.3
Spipo4G0005600 Spirodela polyrhiza HOM04M000607 3.0e-33 143.7 108 68.5
LOC_Os04g38880 Oryza sativa ssp. japonica HOM04M000607 1.1e-32 141.7 88 79.5
OsR498G0408710000.01 Oryza sativa ssp. indica HOM04M000607 1.1e-32 141.7 88 79.5
MAC03G2552 Musa acuminata HOM04M000607 1.1e-32 141.7 100 73.0
Sobic.006G108500 Sorghum bicolor HOM04M000607 2.0e-32 141.0 97 75.3
PH01000501G0740 Phyllostachys edulis HOM04M000607 3.3e-32 140.2 90 76.7
Zm00001d003400 Zea mays HOM04M000607 5.7e-32 139.4 129 62.8
OsR498G0204182200.01 Oryza sativa ssp. indica HOM04M000607 3.7e-31 136.7 90 75.6
LOC_Os02g36990 Oryza sativa ssp. japonica HOM04M000607 3.7e-31 136.7 90 75.6
OB02G29380 Oryza brachyantha HOM04M000607 6.3e-31 136.0 91 74.7
MAC02G1898 Musa acuminata HOM04M000607 1.8e-30 134.4 120 61.7
Sobic.004G192700 Sorghum bicolor HOM04M000607 9.1e-30 132.1 84 78.6
MAC11G2387 Musa acuminata HOM04M000607 1.2e-29 131.7 104 67.3
Solyc01g005460.2 Solanum lycopersicum HOM04M000607 1.5e-29 131.3 96 68.8
Bradi3g46970 Brachypodium distachyon HOM04M000607 2.2e-28 127.5 83 77.1
AT1G23220 Arabidopsis thaliana HOM04M000607 8.5e-28 125.6 93 66.7
PH01002075G0070 Phyllostachys edulis HOM04M000607 1.1e-27 125.2 156 50.0
TAE28298G001 Triticum aestivum HOM04M000607 7.2e-27 122.5 86 73.3
Spipo2G0022100 Spirodela polyrhiza HOM04M000607 1.2e-26 121.7 90 68.9
PH01002092G0410 Phyllostachys edulis HOM04M000607 1.0e-25 118.6 91 76.9
PH01003005G0260 Phyllostachys edulis HOM04M000607 3.0e-25 117.1 90 76.7
AT5G20110 Arabidopsis thaliana HOM04M000607 5.1e-25 116.3 97 57.7
SMO329G0070 Selaginella moellendorffii HOM04M000607 8.8e-25 115.5 97 61.9
GSVIVG01014353001 Vitis vinifera HOM04M000607 9.7e-24 112.1 92 56.5
Oropetium_20150105_25078 Oropetium thomaeum HOM04M000607 2.2e-23 110.9 91 56.0
ATR0730G034 Amborella trichopoda HOM04M000607 4.8e-23 109.8 95 60.0
GSVIVG01008092001 Vitis vinifera HOM04M000607 6.3e-23 109.4 93 58.1
Potri.001G124700 Populus trichocarpa HOM04M000607 6.3e-23 109.4 93 53.8
Solyc06g071180.2 Solanum lycopersicum HOM04M000607 8.2e-23 109.0 93 59.1
PH01001166G0100 Phyllostachys edulis HOM04M000607 1.4e-22 108.2 91 54.9
Solyc12g006630.1 Solanum lycopersicum HOM04M000607 1.4e-22 108.2 92 54.3
Potri.015G067800 Populus trichocarpa HOM04M000607 1.4e-22 108.2 92 57.6
GSVIVG01018666001 Vitis vinifera HOM04M000607 1.8e-22 107.8 93 59.1
SMO145G0273 Selaginella moellendorffii HOM04M000607 1.8e-22 107.8 92 58.7
OB01G29070 Oryza brachyantha HOM04M000607 2.4e-22 107.5 91 54.9
Bradi2g41020 Brachypodium distachyon HOM04M000607 3.1e-22 107.1 91 53.8
Zm00001d009402 Zea mays HOM04M000607 3.1e-22 107.1 91 53.8
Sobic.003G185300 Sorghum bicolor HOM04M000607 3.1e-22 107.1 91 53.8
Seita.5G195400 Setaria italica HOM04M000607 3.1e-22 107.1 91 53.8
GSVIVG01015506001 Vitis vinifera HOM04M000607 5.3e-22 106.3 92 53.3
Aco005803 Ananas comosus HOM04M000607 7.0e-22 105.9 91 54.9
Potri.011G120400 Populus trichocarpa HOM04M000607 2.0e-21 104.4 98 55.1
OsR498G0101312200.01 Oryza sativa ssp. indica HOM04M000607 3.5e-21 103.6 90 53.3
LOC_Os01g37490 Oryza sativa ssp. japonica HOM04M000607 3.5e-21 103.6 90 53.3
Spipo26G0025200 Spirodela polyrhiza HOM04M000607 1.3e-20 101.7 96 57.3
Solyc03g113540.2 Solanum lycopersicum HOM04M000607 2.2e-20 100.9 95 54.7
Potri.001G401400 Populus trichocarpa HOM04M000607 5.0e-20 99.8 95 52.6
Potri.003G108700 Populus trichocarpa HOM04M000607 1.5e-19 98.2 93 51.6
Solyc07g063180.2 Solanum lycopersicum HOM04M000607 1.6e-18 94.7 88 54.5
PAB00011896 Picea abies HOM04M000607 1.8e-17 91.3 49 81.6
Mapoly0014s0201 Marchantia polymorpha HOM04M000607 1.4e-14 81.6 93 44.1
Zm00001d029181 Zea mays HOM04M002949 1.4e-14 81.6 50 84.0
EGU2441G1170 Elaeis guineensis HOM04M000607 4.1e-14 80.1 99 45.5
Pp3c13_8460 Physcomitrella patens HOM04M000607 1.6e-13 78.2 106 34.9
ATR1156G077 Amborella trichopoda HOM04M000607 5.9e-13 76.3 66 56.1
EGU1136G0842 Elaeis guineensis HOM04M000607 5.9e-13 76.3 100 38.0
AT4G27360 Arabidopsis thaliana HOM04M000607 7.7e-13 75.9 62 56.5
MAC08G2364 Musa acuminata HOM04M000607 7.7e-13 75.9 95 40.0
Sobic.002G338800 Sorghum bicolor HOM04M000607 1.0e-12 75.5 88 43.2
MAC12G0358 Musa acuminata HOM04M000607 1.0e-12 75.5 88 44.3
Mapoly0084s0084 Marchantia polymorpha HOM04M000607 1.0e-12 75.5 94 43.6
TAE31162G001 Triticum aestivum HOM04M000607 1.0e-12 75.5 100 40.0
MCO01G119 Micromonas commoda HOM04M000607 1.3e-12 75.1 94 45.7
TAE07526G001 Triticum aestivum HOM04M000607 1.7e-12 74.7 100 40.0
SMO365G0002 Selaginella moellendorffii HOM04M000607 1.7e-12 74.7 94 42.6
Pp3c23_21620 Physcomitrella patens HOM04M000607 1.7e-12 74.7 94 43.6
Pp3c20_3493 Physcomitrella patens HOM04M000607 2.2e-12 74.3 94 42.6
Seita.5G057400 Setaria italica HOM04M000607 2.9e-12 73.9 122 36.1
TAE18113G001 Triticum aestivum HOM04M000607 3.8e-12 73.6 100 39.0
Aco001845 Ananas comosus HOM04M000607 3.8e-12 73.6 89 41.6
Aco010779 Ananas comosus HOM04M000607 3.8e-12 73.6 87 40.2
Zjn_sc00001.1.g06850.1.am.mk Zoysia japonica ssp. nagirizaki HOM04M000607 5.0e-12 73.2 86 44.2
Solyc01g066590.2 Solanum lycopersicum HOM04M000607 6.5e-12 72.8 89 42.7
MAC12G1559 Musa acuminata HOM04M000607 8.5e-12 72.4 95 38.9
Zosma2g03600 Zostera marina HOM04M000607 1.1e-11 72.0 85 43.5
Potri.011G126400 Populus trichocarpa HOM04M000607 1.1e-11 72.0 58 55.2
HVU0038G0076 Hordeum vulgare HOM04M000607 1.1e-11 72.0 99 39.4
Seita.5G325800 Setaria italica HOM04M000607 1.1e-11 72.0 95 40.0
Seita.2G352400 Setaria italica HOM04M000607 1.5e-11 71.6 81 45.7
LOC_Os01g15260 Oryza sativa ssp. japonica HOM04M000607 1.5e-11 71.6 89 40.4
OsR498G0100576100.01 Oryza sativa ssp. indica HOM04M000607 1.5e-11 71.6 89 40.4
MAC04G2932 Musa acuminata HOM04M000607 1.9e-11 71.2 82 47.6
MAC02G0530 Musa acuminata HOM04M000607 1.9e-11 71.2 102 43.1
Pp3c26_11770 Physcomitrella patens HOM04M000607 1.9e-11 71.2 84 38.1
PEQU_23644 Phalaenopsis equestris HOM04M000607 1.9e-11 71.2 126 36.5
Potri.001G407900 Populus trichocarpa HOM04M000607 1.9e-11 71.2 101 42.6
Pp3c11_9560 Physcomitrella patens HOM04M000607 1.9e-11 71.2 95 42.1
Zm00001d043386 Zea mays HOM04M000607 2.5e-11 70.9 95 38.9
Sobic.003G303100 Sorghum bicolor HOM04M000607 2.5e-11 70.9 95 40.0
GSVIVG01014443001 Vitis vinifera HOM04M000607 2.5e-11 70.9 60 50.0
Solyc07g063610.2 Solanum lycopersicum HOM04M000607 3.2e-11 70.5 54 57.4
MAC10G1500 Musa acuminata HOM04M000607 3.2e-11 70.5 82 47.6
SMO361G0543 Selaginella moellendorffii HOM04M000607 3.2e-11 70.5 93 41.9
PAB00002040 Picea abies HOM04M000607 5.5e-11 69.7 95 38.9
GSVIVG01035125001 Vitis vinifera HOM04M000607 5.5e-11 69.7 53 54.7
TAE32095G004 Triticum aestivum HOM04M000607 7.2e-11 69.3 118 36.4
Cre03.g181150 Chlamydomonas reinhardtii HOM04M000607 7.2e-11 69.3 92 44.6
TAE32331G001 Triticum aestivum HOM04M000607 7.2e-11 69.3 118 36.4
PAB00011895 Picea abies HOM04M000607 7.2e-11 69.3 61 62.3
Bradi2g50470 Brachypodium distachyon HOM04M000607 9.4e-11 68.9 97 39.2
MAC03G0005 Musa acuminata HOM04M000607 1.2e-10 68.6 95 37.9
Zjn_sc00008.1.g11180.1.am.mk Zoysia japonica ssp. nagirizaki HOM04M000607 1.2e-10 68.6 86 46.5
GSVIVG01017066001 Vitis vinifera HOM04M000607 1.2e-10 68.6 95 37.9
OB01G20030 Oryza brachyantha HOM04M000607 1.2e-10 68.6 53 54.7
Oropetium_20150105_09732 Oropetium thomaeum HOM04M000607 1.2e-10 68.6 53 54.7
Aco018121 Ananas comosus HOM04M000607 1.6e-10 68.2 48 54.2
TAE18384G002 Triticum aestivum HOM04M000607 1.6e-10 68.2 118 35.6
Zm00001d018955 Zea mays HOM04M000002 1.6e-10 68.2 39 87.2
Zm00001d040291 Zea mays HOM04M000607 1.6e-10 68.2 132 34.8
OB01G40600 Oryza brachyantha HOM04M000607 2.1e-10 67.8 95 38.9
LOC_Os01g55510 Oryza sativa ssp. japonica HOM04M000607 2.7e-10 67.4 95 38.9
Zm00001d008330 Zea mays HOM04M000607 2.7e-10 67.4 122 35.2
Spipo6G0048500 Spirodela polyrhiza HOM04M000607 2.7e-10 67.4 84 42.9
Potri.008G219900 Populus trichocarpa HOM04M000607 2.7e-10 67.4 84 42.9
Spipo26G0004300 Spirodela polyrhiza HOM04M000607 6.1e-10 66.2 95 38.9
Solyc12g044240.1 Solanum lycopersicum HOM04M000607 8.0e-10 65.9 98 36.7
EGU2441G0321 Elaeis guineensis HOM04M000607 8.0e-10 65.9 93 38.7
Potri.003G052800 Populus trichocarpa HOM04M000607 1.0e-09 65.5 98 36.7
Potri.006G091800 Populus trichocarpa HOM04M000607 1.0e-09 65.5 93 38.7
ATR0315G147 Amborella trichopoda HOM04M000607 1.0e-09 65.5 95 37.9
MAC08G0490 Musa acuminata HOM04M000607 1.4e-09 65.1 93 35.5
TAE54407G001 Triticum aestivum HOM04M000607 1.4e-09 65.1 109 37.6
Solyc03g120690.2 Solanum lycopersicum HOM04M000607 1.4e-09 65.1 84 38.1
AT1G52245 Arabidopsis thaliana HOM04M000607 1.4e-09 65.1 98 36.7
TAE45084G002 Triticum aestivum HOM04M000607 1.8e-09 64.7 109 36.7
AT3G16120 Arabidopsis thaliana HOM04M000607 2.3e-09 64.3 89 36.0
HVU0045G0266 Hordeum vulgare HOM04M000607 2.3e-09 64.3 111 36.9
Zosma50g00700 Zostera marina HOM04M000607 3.0e-09 63.9 50 54.0
GSVIVG01034075001 Vitis vinifera HOM04M000607 3.0e-09 63.9 81 39.5
Zosma97g00670 Zostera marina HOM04M000607 5.2e-09 63.2 82 36.6
OB02G20350 Oryza brachyantha HOM04M000607 5.2e-09 63.2 89 38.2
Bradi3g10020 Brachypodium distachyon HOM04M000607 5.2e-09 63.2 95 37.9
TAE52838G001 Triticum aestivum HOM04M000607 6.8e-09 62.8 95 38.9
TAE23679G001 Triticum aestivum HOM04M000607 6.8e-09 62.8 95 38.9
LOC_Os02g16909 Oryza sativa ssp. japonica HOM04M000607 1.2e-08 62.0 89 37.1
Seita.1G007800 Setaria italica HOM04M000607 1.2e-08 62.0 89 37.1
OsR498G0203384900.01 Oryza sativa ssp. indica HOM04M000607 1.2e-08 62.0 89 37.1
Sobic.004G122500 Sorghum bicolor HOM04M000607 1.2e-08 62.0 89 39.3
GSVIVG01015372001 Vitis vinifera HOM04M000607 1.2e-08 62.0 93 35.5
MAC03G0603 Musa acuminata HOM04M000607 2.0e-08 61.2 93 36.6
Zm00001d016016 Zea mays HOM04M000607 2.0e-08 61.2 100 36.0
Potri.004G034000 Populus trichocarpa HOM04M000607 2.6e-08 60.8 93 39.8
EGU0373G0006 Elaeis guineensis HOM04M000607 3.4e-08 60.5 55 41.8
Zjn_sc00009.1.g11240.1.am.mk Zoysia japonica ssp. nagirizaki HOM04M000336 3.4e-08 60.5 46 47.8
ATR0693G081 Amborella trichopoda HOM04M000607 4.4e-08 60.1 47 53.2
Zjn_sc00138.1.g00720.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04M000607 7.5e-08 59.3 51 47.1
Aco002477 Ananas comosus HOM04M000607 1.3e-07 58.5 134 31.3
Oropetium_20150105_19106 Oropetium thomaeum HOM04M000607 1.7e-07 58.2 45 48.9
Oropetium_20150105_27705 Oropetium thomaeum HOM04M000607 1.7e-07 58.2 45 48.9
PH01002704G0080 Phyllostachys edulis HOM04M000607 1.7e-07 58.2 45 48.9
PAB00041239 Picea abies HOM04M000607 2.2e-07 57.8 79 41.8
PEQU_19645 Phalaenopsis equestris HOM04M000607 3.7e-07 57.0 47 66.0
PAB00044656 Picea abies HOM04M000607 7.0e-06 52.8 68 39.7

Amborella trichopoda (5 genes)
Ananas comosus (6 genes)
Arabidopsis thaliana (5 genes)
Brachypodium distachyon (6 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (6 genes)
Hordeum vulgare (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Musa acuminata (12 genes)
Oropetium thomaeum (7 genes)
Oryza brachyantha (5 genes)
Oryza sativa ssp. indica (6 genes)
Oryza sativa ssp. japonica (7 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (6 genes)
Physcomitrella patens (5 genes)
Picea abies (5 genes)
Populus trichocarpa (13 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (7 genes)
Solanum lycopersicum (9 genes)
Sorghum bicolor (7 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (17 genes)
Vitis vinifera (10 genes)
Zea mays (12 genes)
Zostera marina (4 genes)
Zoysia japonica ssp. nagirizaki (7 genes)