Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Gene Family E-value Bitscore Alignment Length Identity Percentage
Oropetium_20150105_00483 Oropetium thomaeum HOM04M001024 1.2e-288 993.8 491 100.0
Sobic.001G459800 Sorghum bicolor HOM04M001024 1.2e-251 870.9 481 91.7
Seita.9G494000 Setaria italica HOM04M001024 2.9e-250 866.3 481 91.1
PH01000106G0920 Phyllostachys edulis HOM04M001024 6.5e-250 865.1 481 90.2
PH01000531G0030 Phyllostachys edulis HOM04M001024 9.3e-249 861.3 481 89.6
EGU1474G0745 Elaeis guineensis HOM04M001024 1.5e-246 854.0 481 88.6
EGU2755G0611 Elaeis guineensis HOM04M001024 1.8e-244 847.0 481 87.7
EGU1876G0092 Elaeis guineensis HOM04M001024 9.0e-244 844.7 481 87.3
PH01000716G0610 Phyllostachys edulis HOM04M001024 1.0e-242 841.3 481 86.9
Seita.6G105300 Setaria italica HOM04M001024 1.0e-242 841.3 481 86.9
PH01003110G0010 Phyllostachys edulis HOM04M001024 1.0e-242 841.3 505 83.8
Aco012399 Ananas comosus HOM04M001024 1.3e-242 840.9 481 87.5
Zm00001d034072 Zea mays HOM04M001024 2.2e-242 840.1 481 86.9
Zjn_sc00014.1.g04770.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04M001024 6.5e-242 838.6 481 86.7
Sobic.001G084100 Sorghum bicolor HOM04M001024 6.5e-242 838.6 481 86.7
Seita.9G085800 Setaria italica HOM04M001024 8.4e-242 838.2 481 86.7
EGU2441G1552 Elaeis guineensis HOM04M001024 1.1e-241 837.8 481 86.9
HVU0040G2160 Hordeum vulgare HOM04M001024 1.1e-241 837.8 481 86.5
TAE00217G001 Triticum aestivum HOM04M001024 1.1e-241 837.8 481 86.5
Zm00001d013245 Zea mays HOM04M001024 1.9e-241 837.0 481 86.3
Oropetium_20150105_13768 Oropetium thomaeum HOM04M001024 4.2e-241 835.9 481 86.5
PH01000716G0600 Phyllostachys edulis HOM04M001024 7.1e-241 835.1 480 86.2
TAE55567G001 Triticum aestivum HOM04M001024 7.1e-241 835.1 481 86.3
Zjn_sc00013.1.g04780.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04M001024 1.2e-240 834.3 491 84.5
Bradi4g25140 Brachypodium distachyon HOM04M001024 1.0e-239 831.2 481 85.9
OsR498G1221501200.01 Oryza sativa ssp. indica HOM04M001024 1.8e-239 830.5 481 85.9
LOC_Os12g25690 Oryza sativa ssp. japonica HOM04M001024 1.8e-239 830.5 481 85.9
Spipo2G0088200 Spirodela polyrhiza HOM04M001024 8.7e-239 828.2 481 86.1
Aco004861 Ananas comosus HOM04M001024 1.1e-238 827.8 481 85.9
ATR0064G109 Amborella trichopoda HOM04M001024 1.1e-238 827.8 481 85.7
OsR498G0307076300.01 Oryza sativa ssp. indica HOM04M001024 2.5e-238 826.6 481 85.7
LOC_Os03g55070 Oryza sativa ssp. japonica HOM04M001024 2.5e-238 826.6 481 85.7
Bradi1g08120 Brachypodium distachyon HOM04M001024 3.3e-238 826.2 481 84.8
OB02G27110 Oryza brachyantha HOM04M001024 3.3e-238 826.2 481 85.2
OsR498G1221500400.01 Oryza sativa ssp. indica HOM04M001024 1.6e-237 823.9 481 85.0
LOC_Os12g25700 Oryza sativa ssp. japonica HOM04M001024 1.6e-237 823.9 481 85.0
Aco003871 Ananas comosus HOM04M001024 2.8e-237 823.2 482 85.7
OB03G41740 Oryza brachyantha HOM04M001024 2.8e-237 823.2 482 85.3
HVU0041G3650 Hordeum vulgare HOM04M001024 2.8e-237 823.2 481 84.6
OB12G19290 Oryza brachyantha HOM04M001024 4.8e-237 822.4 481 85.0
TAE24696G004 Triticum aestivum HOM04M001024 1.1e-236 821.2 481 84.4
Zosma52g00350 Zostera marina HOM04M001024 5.3e-236 818.9 481 84.4
TAE10307G002 Triticum aestivum HOM04M001024 9.0e-236 818.1 481 84.2
Bradi1g10650 Brachypodium distachyon HOM04M001024 3.4e-235 816.2 482 84.6
TAE22318G001 Triticum aestivum HOM04M001024 1.0e-234 814.7 481 83.2
AT5G15490 Arabidopsis thaliana HOM04M001024 2.9e-234 813.1 481 83.2
Spipo3G0012400 Spirodela polyrhiza HOM04M001024 5.0e-234 812.4 481 83.8
Solyc02g067080.2 Solanum lycopersicum HOM04M001024 1.4e-233 810.8 476 83.4
Potri.017G092000 Populus trichocarpa HOM04M001024 5.5e-233 808.9 482 83.2
HVU0040G2597 Hordeum vulgare HOM04M001024 5.5e-233 808.9 481 82.5
AT3G29360 Arabidopsis thaliana HOM04M001024 2.1e-232 807.0 481 82.3
Zosma205g00200 Zostera marina HOM04M001024 4.6e-232 805.8 481 82.7
Pp3c20_1250 Physcomitrella patens HOM04M001024 3.0e-231 803.1 476 83.4
Pp3c23_18200 Physcomitrella patens HOM04M001024 8.8e-231 801.6 476 82.8
AT5G39320 Arabidopsis thaliana HOM04M001024 3.7e-229 796.2 478 81.0
Potri.004G118600 Populus trichocarpa HOM04M001024 4.8e-229 795.8 482 82.8
Pp3c8_22500 Physcomitrella patens HOM04M001024 2.4e-228 793.5 476 82.1
Solyc06g069550.1 Solanum lycopersicum HOM04M001024 5.3e-228 792.3 481 80.2
Solyc03g115380.1 Solanum lycopersicum HOM04M001024 1.2e-227 791.2 481 81.3
OsR498G0306243700.01 Oryza sativa ssp. indica HOM04M001024 2.0e-227 790.4 482 81.1
SMO351G0079 Selaginella moellendorffii HOM04M001024 3.6e-224 779.6 479 80.0
Pp3c24_18230 Physcomitrella patens HOM04M001024 3.6e-224 779.6 477 81.1
Potri.008G094300 Populus trichocarpa HOM04M001024 7.9e-224 778.5 481 79.8
TAE10392G001 Triticum aestivum HOM04M001024 3.3e-222 773.1 482 78.4
Mapoly0108s0005 Marchantia polymorpha HOM04M001024 3.3e-222 773.1 480 80.2
Potri.010G159800 Populus trichocarpa HOM04M001024 9.7e-222 771.5 481 79.6
TAE43085G001 Triticum aestivum HOM04M001024 3.7e-221 769.6 480 78.3
LOC_Os03g40720 Oryza sativa ssp. japonica HOM04M001024 1.8e-220 767.3 483 77.8
OsR498G0306523600.01 Oryza sativa ssp. indica HOM04M001024 1.8e-220 767.3 482 77.8
Zjn_sc00046.1.g00420.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04M001024 7.0e-220 765.4 482 78.2
TAE53301G001 Triticum aestivum HOM04M001024 2.6e-219 763.5 482 77.8
Zm00001d033188 Zea mays HOM04M001024 2.7e-216 753.4 482 77.6
AT1G26570 Arabidopsis thaliana HOM04M001024 2.7e-216 753.4 482 76.8
Sobic.001G171300 Sorghum bicolor HOM04M001024 6.7e-215 748.8 482 77.2
LOC_Os03g31210 Oryza sativa ssp. japonica HOM04M001024 1.5e-214 747.7 491 76.6
Seita.9G172200 Setaria italica HOM04M001024 2.4e-212 740.3 483 76.4
Oropetium_20150105_08494 Oropetium thomaeum HOM04M001024 1.5e-209 731.1 487 74.9
PAB00041318 Picea abies HOM04M001024 1.9e-209 730.7 448 82.1
TAE13178G003 Triticum aestivum HOM04M001024 6.8e-207 722.2 481 77.3
MAC09G2134 Musa acuminata HOM04M001024 4.0e-191 669.8 481 73.4
TAE35196G001 Triticum aestivum HOM04M001024 2.0e-190 667.5 466 73.4
OB03G33750 Oryza brachyantha HOM04M001024 7.3e-185 649.0 465 71.0
Oropetium_20150105_07617 Oropetium thomaeum HOM04M001024 2.3e-183 644.0 370 86.5
MAC09G2966 Musa acuminata HOM04M001024 2.9e-181 637.1 478 70.3
TAE24787G001 Triticum aestivum HOM04M001024 1.7e-178 627.9 370 82.7
TAE28315G001 Triticum aestivum HOM04M001024 2.3e-178 627.5 370 82.7
Zjn_sc00162.1.g00390.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04M003862 1.5e-177 624.8 482 64.3
Cre07.g357200 Chlamydomonas reinhardtii HOM04M001024 3.6e-176 620.2 474 65.4
Cre06.g278185 Chlamydomonas reinhardtii HOM04M001024 1.8e-175 617.8 475 65.5
MAC10G2299 Musa acuminata HOM04M001024 9.2e-172 605.5 481 66.9
MAC09G2860 Musa acuminata HOM04M001024 3.5e-171 603.6 481 68.0
MAC09G0045 Musa acuminata HOM04M001024 6.8e-167 589.3 480 65.8
MCO16G201 Micromonas commoda HOM04M001024 3.4e-166 587.0 478 63.0
MAC07G1108 Musa acuminata HOM04M001024 5.8e-166 586.3 481 66.3
MAC08G0117 Musa acuminata HOM04M001024 5.4e-164 579.7 481 65.7
Seita.2G003000 Setaria italica HOM04M001024 3.5e-163 577.0 486 60.3
MAC06G0328 Musa acuminata HOM04M001024 1.3e-162 575.1 481 65.7
Zjn_sc00002.1.g10510.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04M001024 8.6e-162 572.4 386 77.5
PAB00050125 Picea abies HOM04M001024 1.1e-159 565.5 478 62.1
OB12G19300 Oryza brachyantha HOM04M001024 3.3e-153 543.9 331 84.0
MAC07G0586 Musa acuminata HOM04M001024 5.8e-150 533.1 481 61.5
Cre12.g532450 Chlamydomonas reinhardtii HOM04M001024 4.2e-148 526.9 475 54.9
Solyc02g088690.2 Solanum lycopersicum HOM04M001024 5.6e-145 516.5 300 86.0
GSVIVG01012198001 Vitis vinifera HOM04M001024 4.5e-134 480.3 370 68.1
GSVIVG01007910001 Vitis vinifera HOM04M001024 2.9e-133 477.6 481 55.5
PAB00035708 Picea abies HOM04M001024 2.1e-131 471.5 278 85.3
MAC06G0630 Musa acuminata HOM04M001024 2.7e-131 471.1 481 56.8
ATR0582G178 Amborella trichopoda HOM04M001024 3.9e-122 440.7 287 74.2
GSVIVG01011507001 Vitis vinifera HOM04M001024 7.9e-115 416.4 466 52.1
Mapoly0110s0053 Marchantia polymorpha HOM04M001024 3.2e-100 367.9 237 74.7
Mapoly1179s0001 Marchantia polymorpha HOM04M001024 5.5e-100 367.1 230 75.7
Solyc03g065350.1 Solanum lycopersicum HOM04M001024 1.2e-91 339.3 407 49.1
Mapoly0108s0006 Marchantia polymorpha HOM04M001024 9.1e-87 323.2 201 82.1
PEQU_39526 Phalaenopsis equestris HOM04M001024 1.5e-84 315.8 164 88.4
PAB00063640 Picea abies HOM04M001024 1.8e-82 308.9 164 85.4
PEQU_39737 Phalaenopsis equestris HOM04M001024 2.0e-78 295.4 164 82.9
AT3G01010 Arabidopsis thaliana HOM04M001024 2.9e-72 275.0 164 79.9
ATR0582G061 Amborella trichopoda HOM04M001024 7.8e-70 266.9 171 77.2
PAB00058142 Picea abies HOM04M001024 7.8e-70 266.9 165 77.0
PAB00037379 Picea abies HOM04M001024 1.2e-59 233.0 147 81.0
MAC03G0734 Musa acuminata HOM04M001024 4.7e-59 231.1 164 69.5
PEQU_37963 Phalaenopsis equestris HOM04M001024 1.5e-57 226.1 128 88.3
PAB00030650 Picea abies HOM04M001024 6.2e-51 204.1 113 82.3
PAB00035707 Picea abies HOM04M001024 1.4e-50 203.0 158 63.9
PEQU_24592 Phalaenopsis equestris HOM04M001024 1.0e-45 186.8 122 76.2
PH01000339G0670 Phyllostachys edulis HOM04M001024 1.8e-42 176.0 179 51.4
PH01001640G0300 Phyllostachys edulis HOM04M003862 1.5e-36 156.4 127 58.3
OsR498G0409152100.01 Oryza sativa ssp. indica HOM04M001024 9.0e-34 147.1 174 52.3
Zjn_sc00019.1.g01540.1.am.mk Zoysia japonica ssp. nagirizaki HOM04M001024 2.2e-32 142.5 190 45.3
PAB00037378 Picea abies HOM04M001024 4.6e-30 134.8 75 82.7
LOC_Os04g49250 Oryza sativa ssp. japonica HOM04M001024 3.4e-25 118.6 158 48.1
PEQU_26992 Phalaenopsis equestris HOM04M001024 3.1e-18 95.5 67 73.1
PEQU_26991 Phalaenopsis equestris HOM04M003437 2.9e-16 89.0 67 70.1
Oropetium_20150105_19037 Oropetium thomaeum HOM04M001024 1.3e-13 80.1 176 28.4
Oropetium_20150105_19038 Oropetium thomaeum HOM04M001024 1.8e-13 79.7 77 54.5
PAB00063158 Picea abies HOM04M001024 8.2e-11 70.9 41 80.5
MCO17G043 Micromonas commoda HOM04M001024 8.2e-11 70.9 206 29.6
PH01000658G0360 Phyllostachys edulis HOM04M001024 3.2e-07 58.9 78 47.4

Amborella trichopoda (3 genes)
Ananas comosus (3 genes)
Arabidopsis thaliana (5 genes)
Brachypodium distachyon (3 genes)
Chlamydomonas reinhardtii (3 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (3 genes)
Marchantia polymorpha (4 genes)
Micromonas commoda (2 genes)
Musa acuminata (11 genes)
Oropetium thomaeum (6 genes)
Oryza brachyantha (5 genes)
Oryza sativa ssp. indica (6 genes)
Oryza sativa ssp. japonica (6 genes)
Phalaenopsis equestris (6 genes)
Phyllostachys edulis (8 genes)
Physcomitrella patens (4 genes)
Picea abies (10 genes)
Populus trichocarpa (4 genes)
Selaginella moellendorffii (1 genes)
Setaria italica (5 genes)
Solanum lycopersicum (5 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (12 genes)
Vitis vinifera (3 genes)
Zea mays (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (6 genes)