PLAZA 4.0 Dicots gene overview : AT3TE43960

Gene: AT3TE43960 (Arabidopsis thaliana)

Overview

Gene Identifier: AT3TE43960
Transcript Identifier: AT3TE43960
Gene Type: Transposon
Location: Chr3 : 10571528-10571673 : positive

Family

No gene family defined for this gene.

Descriptions

Identifiers

Type	Value
Alias	ARNOLD4

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

Create

...a custom phylogenetic tree using this gene as seed.

View

...sequences.
...the multiple sequence alignment of the gene family with BioJS
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...all colinear gene pairs.

Browse

...the gene in IGV.js, a genome browser

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

No InterPro domains detected for this gene.

No MapMan annotations defined for this gene.

No SignalP domains detected for this gene.