Anchorpoints
- Gene id
- AT3G55840
- Organism
- Arabidopsis thaliana
Paralogs (intra-species colinear regions)
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AT2G40000 | ortholog of sugar beet HS1 PRO-1 2 ortholog of sugar beet HS1 PRO-1 2 (HSPRO2)%3B CONTAINS InterPro DOMAIN/s: Hs1pro-1%2C C-terminal (InterPro:IPR009743)%2C Hs1pro-1%2C N-terminal (InterPro:IPR009869)%3B BEST Arabidopsis thaliana protein match is: Hs1pro-1 protein (TAIR:AT3G55840.1)%3B Has 71 Blast hits to 71 proteins in 18 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 11 (source: NCBI BLink). | Chr2 | - | View |
Orthologs (inter-species colinear regions)
Actinidia chinensis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Achn140961 | Nematode-resistance protein; contains IPR009743 (Hs1pro-1, C-terminal), IPR009869 (Hs1pro-1, N-terminal) | Chr24 | - | View |
Amaranthus hypochondriacus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AH023070 | Similar to HSPRO2: Nematode resistance protein-like HSPRO2 (Arabidopsis thaliana) | Scaffold_16 | - | View |
Arabidopsis lyrata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AL5G37130 | No description available. | scaffold_5 | - | View |
AL4G37600 | No description available. | scaffold_4 | - | View |
Brassica oleracea
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bo8g090250 | Hs1pro-1 protein | C8 | - | View |
Bo4g188730 | No description available. | C4 | - | View |
Bo3g034610 | No description available. | C3 | - | View |
Bo4g025650 | No description available. | C4 | + | View |
Brassica rapa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Brara.E00580 | No description available. | A05 | + | View |
Brara.I03831 | No description available. | A09 | - | View |
Brara.D02425 | No description available. | A04 | - | View |
Brara.C02045 | No description available. | A03 | - | View |
Beta vulgaris
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Bv2_024040_gkaf | No description available. | Bvchr2.sca001 | + | View |
Cicer arietinum
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Ca_12499.g | No description available. | Ca2 | - | View |
Ca_10320.g | No description available. | Ca6 | - | View |
Cajanus cajan
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
C.cajan_27909.g | No description available. | Scaffold132713 | + | View |
Coffea canephora
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Cc02_g06790 | Nematode resistance protein-like HSPRO2 | chr2 | + | View |
Citrus clementina
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Ciclev10031447m.g | No description available. | scaffold_4 | - | View |
Citrullus lanatus
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Cla006580.g | Nematode resistance protein (Fragment) | Chr11 | - | View |
Cucumis melo
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MELO3C008286 | No description available. | CM3.5_scaffold00008 | - | View |
Carica papaya
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Cpa.g.sc19.206 | No description available. | supercontig_19 | - | View |
Chenopodium quinoa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
AUR62012225 | HSPRO2: Nematode resistance protein-like HSPRO2 | C_Quinoa_Scaffold_1995 | - | View |
AUR62022857 | HSPRO2: Nematode resistance protein-like HSPRO2 | C_Quinoa_Scaffold_3378 | - | View |
Capsella rubella
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Carubv10025158m.g | No description available. | scaffold_4 | - | View |
Carubv10019166m.g | No description available. | scaffold_5 | - | View |
Cucumis sativus L.
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Cucsa.136520 | No description available. | scaffold01044 | - | View |
Daucus carota
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
DCAR_011797 | hypothetical protein | DCARv2_Chr3 | - | View |
Eucalyptus grandis
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Eucgr.J00236 | No description available. | Chr10 | + | View |
Eucgr.G03040 | No description available. | Chr07 | - | View |
Fragaria vesca
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
FVE20931 | No description available. | LG7 | - | View |
Glycine max
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Glyma.02G255400 | No description available. | Chr02 | - | View |
Glyma.11G228100 | No description available. | Chr11 | - | View |
Glyma.18G029300 | No description available. | Chr18 | + | View |
Glyma.14G061200 | No description available. | Chr14 | + | View |
Gossypium raimondii
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Gorai.009G322100 | No description available. | Chr09 | - | View |
Gorai.013G019200 | No description available. | Chr13 | + | View |
Malus domestica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
MDO.mRNA.g.345.58 | No description available. | Backbone_345 | - | View |
Manihot esculenta
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Manes.10G016200 | No description available. | Chromosome10 | + | View |
Manes.07G126900 | No description available. | Chromosome07 | - | View |
Medicago truncatula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Medtr5g082150 | nematode resistance HSPRO2-like protein | chr5 | - | View |
Medtr3g070230 | nematode resistance HSPRO2-like protein | chr3 | - | View |
Pyrus bretschneideri
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Pbr009495.1.g | No description available. | scaffold16.0 | - | View |
Pbr011333.1.g | No description available. | scaffold18.0 | + | View |
Prunus persica
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Prupe.2G247600 | No description available. | Pp02 | - | View |
Populus trichocarpa
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Potri.008G066000 | similar to putative Hs1pro-1-like protein. [ORG:Cicer arietinum]; [ co-ortholog (1of2) of AAG44839, At2g40000, At3g55840, AAK72104, ] | Chr08 | - | View |
Potri.010G191300 | similar to putative Hs1pro-1-like protein. [ORG:Cicer arietinum]; [ co-ortholog (2of2) of AAG44839, At2g40000, At3g55840, AAK72104, ] | Chr10 | + | View |
Schrenkiella parvula
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Tp4g22310 | HSPRO2 (ARABIDOPSIS ORTHOLOG OF SUGAR BEET HS1 PRO-1 2) | ch4-6 | - | View |
Tp5g06640 | unknown | ch5-1 | + | View |
Theobroma cacao
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
TCA.TCM_042570 | sugar beet HS1 PRO-1 2 | NC_023616.1 | + | View |
Tarenaya hassleriana
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
THA.LOC104824309 | nematode resistance protein-like HSPRO2 | NW_010966881.1 | - | View |
THA.LOC104810079 | nematode resistance protein-like HSPRO2 | NW_010965122.1 | - | View |
Vigna radiata var. radiata
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
Vradi06g04660 | No description available. | Vr06 | + | View |
Vradi03g08740 | No description available. | Vr03 | - | View |
Vitis vinifera
Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|
GSVIVG01032858001 | No description available. | chr13 | - | View |