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Integrative Orthology Viewer:
AT3G28300
(Arabidopsis thaliana)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | AT3G28300 | 1 |  |
| Best-Hits-and-Inparalogs(BHI)family | AT3G28290 AT3G28300 | 2 | ||
| Tree-based ortholog | AT3G28300 AT3G28290 | 2 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Actinidia chinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Achn123371 | 1 | |
| Tree-based ortholog | many-to-1 | Achn123371 | 1 | ||
| Amaranthus hypochondriacus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AH001843 | 1 | |
| Tree-based ortholog | many-to-many | AH005626 AH003995 | 2 | ||
| Amborella trichopoda | Tree-based ortholog | many-to-1 | ATR0733G149 | 1 | |
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AL5G17760 AL5G17790 | 2 | |
| Tree-based ortholog | many-to-many | AL5G17790 AL5G17760 AL5G17800 | 3 | ||
| Arachis ipaensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Araip.814SM | 1 | |
| Tree-based ortholog | many-to-1 | Araip.814SM | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Bv9_217870_unec | 1 | |
| Tree-based ortholog | many-to-many | Bv6_137820_xsok Bv6_137810_pdje | 2 | ||
| Brassica oleracea | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Bo9g021760 | 1 | |
| Tree-based ortholog | many-to-many | Bo6g108390 Bo6g108400 Bo6g108410 | 3 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Brara.I00893 | 1 | |
| Tree-based ortholog | many-to-many | Brara.G02833 Brara.G02834 | 2 | ||
| Cajanus cajan | Tree-based ortholog | many-to-1 | C.cajan_12632.g | 1 | |
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Carubv10019413m.g Carubv10000007m.g Carubv10017404m.g ... | 6 | |
| Tree-based ortholog | many-to-many | Carubv10000007m.g Carubv10000006m.g Carubv10019413m.g ... | 8 | ||
| Capsicum annuum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CAN.G322.110 | 1 | |
| Tree-based ortholog | many-to-1 | CAN.G914.2 | 1 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cpa.g.sc62.111 | 1 | |
| Tree-based ortholog | many-to-1 | Cpa.g.sc158.19 | 1 | ||
| Chenopodium quinoa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | AUR62016703 AUR62011358 | 2 | |
| Tree-based ortholog | many-to-many | AUR62008014 AUR62003197 AUR62008013 ... | 4 | ||
| Cicer arietinum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Ca_16037.g | 1 | |
| Tree-based ortholog | many-to-many | Ca_16037.g Ca_02079.g | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cla007747.g | 1 | |
| Tree-based ortholog | many-to-1 | Cla007747.g | 1 | ||
| Citrus clementina | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Ciclev10025839m.g | 1 | |
| Tree-based ortholog | many-to-1 | Ciclev10025839m.g | 1 | ||
| Coffea canephora | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cc02_g17880 | 1 | |
| Tree-based ortholog | many-to-1 | Cc07_g05110 | 1 | ||
| Corchorus olitorius | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | COL.COLO4_22143 | 1 | |
| Tree-based ortholog | many-to-1 | COL.COLO4_22143 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MELO3C020955 | 1 | |
| Tree-based ortholog | many-to-1 | MELO3C020955 | 1 | ||
| Cucumis sativus L. | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Cucsa.250440 | 1 | |
| Tree-based ortholog | many-to-1 | Cucsa.250440 | 1 | ||
| Daucus carota | Best-Hits-and-Inparalogs(BHI)family | many-to-many | DCAR_026266 DCAR_007517 | 2 | |
| Tree-based ortholog | many-to-many | DCAR_026266 DCAR_007517 | 2 | ||
| Erythranthe guttata | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Migut.B00265 Migut.O00626 | 2 | |
| Tree-based ortholog | many-to-1 | Migut.O00625 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Eucgr.I02475 | 1 | |
| Tree-based ortholog | many-to-1 | Eucgr.I02475 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FVE29520 | 1 | |
| Tree-based ortholog | many-to-many | FVE29568 FVE29520 FVE29567 | 3 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Glyma.16G141800 Glyma.02G059100 | 2 | |
| Tree-based ortholog | many-to-many | Glyma.16G141800 Glyma.02G059100 Glyma.11G063800 ... | 4 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Gorai.003G016900 Gorai.003G017100 | 2 | |
| Tree-based ortholog | many-to-many | Gorai.003G017100 Gorai.003G016900 Gorai.008G069800 | 3 | ||
| Hevea brasiliensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | HBR2513G016 | 1 | |
| Tree-based ortholog | many-to-1 | HBR2513G016 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MDO.mRNA.g.4805.8 | 1 | |
| Tree-based ortholog | many-to-1 | MDO.mRNA.g.4805.8 | 1 | ||
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Manes.13G136100 | 1 | |
| Tree-based ortholog | many-to-many | Manes.13G136100 Manes.12G098700 | 2 | ||
| Marchantia polymorpha | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Mapoly0036s0046 | 1 | |
| Tree-based ortholog | many-to-1 | Mapoly0036s0046 | 1 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Medtr5g019430 | 1 | |
| Tree-based ortholog | many-to-many | Medtr8g078100 Medtr5g019430 | 2 | ||
| Nelumbo nucifera | Best-Hits-and-Inparalogs(BHI)family | many-to-many | NNU_05450 NNU_05948 | 2 | |
| Tree-based ortholog | many-to-many | NNU_05450 NNU_05948 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LOC_Os03g10240 | 1 | |
| Tree-based ortholog | many-to-many | LOC_Os03g10240 LOC_Os10g21540 | 2 | ||
| Petunia axillaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Peaxi162Scf00016g00102 | 1 | |
| Tree-based ortholog | many-to-many | Peaxi162Scf00078g00013 Peaxi162Scf00078g00011 Peaxi162Scf00078g10022 ... | 4 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Pp3c9_13670 | 1 | |
| Tree-based ortholog | many-to-1 | Pp3c9_13670 | 1 | ||
| Picea abies | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PAB00048473 PAB00055091 PAB00049929 | 3 | |
| Tree-based ortholog | many-to-many | PAB00048473 PAB00055091 PAB00049929 | 3 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Potri.007G031200 | 1 | |
| Tree-based ortholog | many-to-many | Potri.005G127200 Potri.005G127300 Potri.007G031300 ... | 4 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Prupe.7G148500 | 1 | |
| Tree-based ortholog | many-to-1 | Prupe.7G148500 | 1 | ||
| Pyrus bretschneideri | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Pbr017245.1.g Pbr022863.1.g | 2 | |
| Tree-based ortholog | many-to-many | Pbr022863.1.g Pbr017245.1.g Pbr002027.1.g | 3 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-many | RCO.g.29646.000003 RCO.g.29646.000005 | 2 | |
| Tree-based ortholog | many-to-many | RCO.g.29646.000005 RCO.g.29646.000003 | 2 | ||
| Schrenkiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Tp2g30030 | 1 | |
| Tree-based ortholog | many-to-1 | Tp2g30040 | 1 | ||
| Selaginella moellendorffii | Best-Hits-and-Inparalogs(BHI)family | many-to-many | SMO367G1038 SMO367G1236 SMO367G0681 | 3 | |
| Tree-based ortholog | many-to-many | SMO275G0004 SMO275G0037 SMO367G0681 ... | 5 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Solyc01g109380.2 | 1 | |
| Tree-based ortholog | many-to-1 | Solyc11g039740.1 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PGSC0003DMG400025185 | 1 | |
| Tree-based ortholog | many-to-1 | PGSC0003DMG400037697 | 1 | ||
| Tarenaya hassleriana | Best-Hits-and-Inparalogs(BHI)family | many-to-many | THA.LOC104826854 THA.LOC104821282 | 2 | |
| Tree-based ortholog | many-to-many | THA.LOC104826854 THA.LOC104821282 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TCA.TCM_000456 | 1 | |
| Tree-based ortholog | many-to-1 | TCA.TCM_000456 | 1 | ||
| Trifolium pratense | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TPR.G20277 | 1 | |
| Tree-based ortholog | many-to-many | TPR.G20277 TPR.G23217 | 2 | ||
| Utricularia gibba | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | UGI.Scf00005.923 | 1 | |
| Tree-based ortholog | many-to-many | UGI.Scf00035.3950 UGI.Scf00158.10094 | 2 | ||
| Vigna radiata var. radiata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | Vradi11g05360 | 1 | |
| Tree-based ortholog | many-to-1 | Vradi11g05360 | 1 | ||
| Vitis vinifera | Tree-based ortholog | many-to-1 | GSVIVG01031916001 | 1 | |
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | Zm00001d048169 Zm00001d028125 | 2 | |
| Tree-based ortholog | many-to-many | Zm00001d048169 Zm00001d048166 Zm00001d028125 | 3 | ||
| Ziziphus jujuba | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZJU.LOC107433932 | 1 | |
| Tree-based ortholog | many-to-1 | ZJU.LOC107433932 | 1 |