Oryza sativa ssp. indica

Oryza sativa indica is a subspecies of the Oryza sativa (commonly known as rice) species. Rice is a major food staple of the world's population, and after the sequencing of the monot model species Oryza sativa japonica, BGI sequenced the indica variety. Both subspecies are of course highly similar in genomic content.

Publication:
A draft sequence of the rice genome (Oryza sativa L. ssp. indica).

Info and Links

Source MBKBASE v1.0
PLAZA identifier osaindica
NCBI link Oryza sativa ssp. indica
Mitochondrion Not available
Chloroplast Not available

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Genes

Annotations

Page 1 of 1936, showing 20 records out of 38714 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Homologous gene familyOrthologous gene family
OsR498G0102028800.01OsR498G0102028800.01.T013292435732929696-Chr1codingHOM04x5M000728ORTHO04x5M001036
OsR498G0100223800.01OsR498G0100223800.01.T0134327163440156-Chr1codingHOM04x5M008152ORTHO04x5M009918
OsR498G0102662400.01OsR498G0102662400.01.T014225497642256214-Chr1codingHOM04x5M000581ORTHO04x5M000534
OsR498G0102157700.01OsR498G0102157700.01.T013497234334973120+Chr1codingHOM04x5M001025ORTHO04x5M001180
OsR498G0102572000.01OsR498G0102572000.01.T014095293540959109-Chr1codingHOM04x5M000870ORTHO04x5M007181
OsR498G0102686500.01OsR498G0102686500.01.T014268915742689360+Chr1codingOrphan GeneOrphan Gene
OsR498G0100208000.01OsR498G0100208000.01.T0130966123096896-Chr1codingHOM04x5M000347ORTHO04x5M000113
OsR498G0101165600.01OsR498G0101165600.01.T021991996619922290-Chr1codingHOM04x5M000408ORTHO04x5M000099
OsR498G0102556000.01OsR498G0102556000.01.T014068260640687181-Chr1codingHOM04x5M000063ORTHO04x5M008322
OsR498G0100082800.01OsR498G0100082800.01.T0112783291278886-Chr1codingHOM04x5M001861ORTHO04x5M001964
OsR498G0100090500.01OsR498G0100090500.01.T0114172231417579+Chr1codingHOM04x5M000408ORTHO04x5M000099
OsR498G0100668900.01OsR498G0100668900.01.T011003556710036797+Chr1codingHOM04x5M000108ORTHO04x5M000342
OsR498G0101951700.01OsR498G0101951700.01.T013171998131720358+Chr1codingHOM04x5M000055ORTHO04x5M000042
OsR498G0102236900.01OsR498G0102236900.01.T013619285336194764+Chr1codingHOM04x5M005731ORTHO04x5M006765
OsR498G0101413800.01OsR498G0101413800.01.T012357013323570591-Chr1codingOrphan GeneOrphan Gene
OsR498G0101788700.01OsR498G0101788700.01.T012933597829336508+Chr1codingOrphan GeneOrphan Gene
OsR498G0101882900.01OsR498G0101882900.01.T013070412230710152+Chr1codingHOM04x5M008130ORTHO04x5M010595
OsR498G0100208600.01OsR498G0100208600.01.T0131052043110184-Chr1codingHOM04x5M001921ORTHO04x5M007225
OsR498G0102329500.01OsR498G0102329500.01.T013744652637449577+Chr1codingHOM04x5M000203ORTHO04x5M000609
OsR498G0100590400.01OsR498G0100590400.01.T0188230218823356-Chr1codingOrphan GeneOrphan Gene