Gene: evm.TU.AsparagusV1_07.1717.V1.1 (Asparagus officinalis)

Overview top

Gene Identifier
evm.TU.AsparagusV1_07.1717.V1.1
Transcript Identifier
evm.model.AsparagusV1_07.1717.V1.1
Gene Type
Coding gene
Location
AsparagusV1_07 : 58408455-58426521 : positive

Family Information

Homologous gene family
HOM04x5M005388
(56 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M007148
(53 genes in 38 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidevm.model.AsparagusV1_07.1717.V1.1
pacid40533119

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006265
IEA
InterProDNA topological change

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003918
IEA
InterProDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524
IEA
InterProATP binding
GO:0003916
ISO
PLAZA Integrative OrthologyDNA topoisomerase activity AT5G04130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
InterProchromosome
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G10270
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G10270
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G10270
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid AT3G10270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003594Histidine kinase/HSP90-like ATPase
IPR034160DNA gyrase subunit B, TOPRIM domain
IPR036890Histidine kinase/HSP90-like ATPase superfamily
IPR013759DNA topoisomerase, type IIA, subunit B, C-terminal
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR006171TOPRIM domain
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2
IPR002288DNA gyrase B subunit, C-terminal
IPR000565DNA topoisomerase, type IIA, subunit B
IPR018522DNA topoisomerase, type IIA, conserved site
IPR001241DNA topoisomerase, type IIA
IPR013760DNA topoisomerase, type IIA-like domain superfamily
IPR020568Ribosomal protein S5 domain 2-type fold
IPR011557DNA gyrase, subunit B

Mapman id Description
13.5.3.2Cell cycle organisation.organellar DNA replication.DNA gyrase complex.subunit B