Gene: evm.TU.AsparagusV1_06.1941.V1.1 (Asparagus officinalis)

Overview top

Gene Identifier
evm.TU.AsparagusV1_06.1941.V1.1
Transcript Identifier
evm.model.AsparagusV1_06.1941.V1.1
Gene Type
Coding gene
Location
AsparagusV1_06 : 76148810-76163511 : positive

Family Information

Homologous gene family
HOM04x5M004220
(66 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M005122
(65 genes in 37 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidevm.model.AsparagusV1_06.1941.V1.1
pacid40547162

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000723
IEA
InterProtelomere maintenance
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G16970
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G16970

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0042162
IEA
InterProtelomeric DNA binding
GO:0004003
IEA
InterProATP-dependent DNA helicase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G16970
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT1G16970

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0043564
IEA
InterProKu70:Ku80 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR036465von Willebrand factor A-like domain superfamily
IPR036361SAP domain superfamily
IPR027388Ku70, bridge and pillars domain superfamily
IPR016194SPOC-like, C-terminal domain superfamily
IPR006165Ku70
IPR005161Ku70/Ku80, N-terminal alpha/beta
IPR003034SAP domain
IPR005160Ku70/Ku80 C-terminal arm
IPR006164Ku70/Ku80 beta-barrel domain

Mapman id Description
14.4.1.1DNA damage response.nonhomologous end-joining (NHEJ) repair.Ku70-Ku80 helicase complex.component KU70