Gene: evm.TU.AsparagusV1_01.3429.V1.1 (Asparagus officinalis)

Overview top

Gene Identifier
evm.TU.AsparagusV1_01.3429.V1.1
Transcript Identifier
evm.model.AsparagusV1_01.3429.V1.1
Gene Type
Coding gene
Location
AsparagusV1_01 : 128617688-128636975 : positive

Family Information

Homologous gene family
HOM04x5M002710
(96 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M003979
(77 genes in 37 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidevm.model.AsparagusV1_01.3429.V1.1
pacid40545331

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
IEA
InterProRNA processing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
InterPronucleic acid binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR035009SR140, RNA recognition motif
IPR012677Nucleotide-binding alpha-beta plait domain superfamily
IPR008942ENTH/VHS
IPR035967SWAP/Surp superfamily
IPR000061SWAP/Surp
IPR013170mRNA splicing factor Cwf21 domain
IPR000504RNA recognition motif domain
IPR003034SAP domain
IPR006569CID domain
IPR035979RNA-binding domain superfamily

Mapman id Description
16.4.1.2.10RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).snRNP-associated protein (SR140)