Gene: Sspon.08G0015980-2B (Saccharum spontaneum)

Overview top

Gene Identifier
Sspon.08G0015980-2B
Transcript Identifier
Sspon.08G0015980-2B-mRNA-1
Gene Type
Coding gene
Location
Chr8B : 58037657-58044116 : negative

Family Information

Homologous gene family
HOM04x5M005821
(53 genes in 36 species)
specific family
Orthologous gene family
ORTHO04x5M007372
(52 genes in 36 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidSspon.08G0015980-2B-mRNA-1
NameSspon.08G0015980-2B

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0090239
ISO
PLAZA Integrative Orthologyregulation of histone H4 acetylation AT5G45600
GO:0048510
ISO
PLAZA Integrative Orthologyregulation of timing of transition from vegetative to reproductive phase AT5G45600
GO:0043981
ISO
PLAZA Integrative Orthologyhistone H4-K5 acetylation AT2G18000
GO:2000028
ISO
PLAZA Integrative Orthologyregulation of photoperiodism, flowering AT2G18000

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G45600

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G45600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR038704YEATS superfamily
IPR005033YEATS
IPR022059Protein of unknown function DUF3615

Mapman id Description
12.4.6.2Chromatin organisation.chromatin remodeling complexes.SWR1/NuA4-shared subcomplex.component YAF9
15.3.5.3.14RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIId basal transcription regulation complex.component TAF14