Gene: Spipo22G0020900 (Spirodela polyrhiza)

Overview top

Gene Identifier
Spipo22G0020900
Transcript Identifier
Spipo22G0020900
Gene Type
Coding gene
Location
pseudo22 : 1602365-1608210 : negative

Family Information

Homologous gene family
HOM04x5M005130
(58 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M006265
(57 genes in 39 species)
specific family

Descriptions

Description
Vacuolar protein sorting protein, putative

Identifiers

Type Value
idSpipo22G0020900.v2
pacid31504826
tidSpipo22G0020900.v2.290

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT5G04920
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G04920
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G04920
GO:0071985
ISO
PLAZA Integrative Orthologymultivesicular body sorting pathway AT5G04920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
InterProubiquitin binding
GO:0032266
IEA
InterProphosphatidylinositol-3-phosphate binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000814
IEA
InterProESCRT II complex
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT5G04920
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G04920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011993PH-like domain superfamily
IPR036388Winged helix-like DNA-binding domain superfamily
IPR037855Vacuolar protein sorting protein 36
IPR021648Vacuolar protein sorting protein 36, GLUE domain
IPR040608Snf8/Vps36 family
IPR036390Winged helix DNA-binding domain superfamily

Mapman id Description
22.5.4.2.3Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-II complex.component VPS36