Gene: Solyc10g052560.1 (Solanum lycopersicum)

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Gene Identifier
Solyc10g052560.1
Transcript Identifier
Solyc10g052560.1.1
Gene Type
Coding gene
Location
SL2.50ch10 : 52919976-52920323 : negative

Family Information

Homologous gene family
HOM04x5M000254
(612 genes in 31 species)
specific family
Orthologous gene family
ORTHO04x5M000186
(561 genes in 29 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Auxin-responsive protein (AHRD V1 ***- A8IXW9_BRACM); contains Interpro domain(s) IPR003676 Auxin responsive SAUR protein

Identifiers

Type Value
idSolyc10g052560.1.ITAG2.4
pacid36153933
tidSolyc10g052560.1.1.ITAG2.4
tidSolyc10g052560.1.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009734
IDA
Gene Ontologyauxin-activated signaling pathway1
GO:0009651
IDA
Gene Ontologyresponse to salt stress1
GO:0009414
ISS
Gene Ontologyresponse to water deprivation1
GO:0009409
IDA
Gene Ontologyresponse to cold1
GO:0009733
IEA
InterProresponse to auxin
GO:0009926
ISO
PLAZA Integrative Orthologyauxin polar transport AT1G29440
GO:0080086
ISO
PLAZA Integrative Orthologystamen filament development AT1G29440
GO:0042255
ISO
PLAZA Integrative Orthologyribosome assembly AT1G29430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G29430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G29430
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G29500
GO:0090406
ISO
PLAZA Integrative Orthologypollen tube AT1G29430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003676Small auxin-up RNA

Mapman id Description
35.1not assigned.annotated