Gene: Solyc04g049490.2 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc04g049490.2
Transcript Identifier
Solyc04g049490.2.1
Gene Type
Coding gene
Location
SL2.50ch04 : 42087503-42107197 : positive

Family Information

Homologous gene family
HOM04x5M004483
(63 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M005884
(59 genes in 39 species)
specific family

Descriptions

Description
Vacuolar protein sorting-associated protein 53 (AHRD V1 **-- D0NTZ4_PHYIN); contains Interpro domain(s) IPR007234 Vps53-like, N-terminal

Identifiers

Type Value
idSolyc04g049490.2.ITAG2.4
pacid36141928
tidSolyc04g049490.2.1.ITAG2.4
tidSolyc04g049490.2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT1G50500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G50500
GO:0007009
ISO
PLAZA Integrative Orthologyplasma membrane organization AT1G50500
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G50500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G50500
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G50500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR039766Vacuolar protein sorting-associated protein 53
IPR007234Vps53-like, N-terminal

Mapman id Description
22.6.1.3Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.component VPS53/HIT1