Gene: Solyc03g118310.2 (Solanum lycopersicum)

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Gene Identifier
Solyc03g118310.2
Transcript Identifier
Solyc03g118310.2.1
Gene Type
Coding gene
Location
SL2.50ch03 : 67224628-67226685 : negative

Family Information

Homologous gene family
HOM04x5M000698
(294 genes in 37 species)
specific family
Orthologous gene family
ORTHO04x5M001924
(127 genes in 37 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
BHLH transcription factor (AHRD V1 *-** A9YWR2_MEDTR); contains Interpro domain(s) IPR011598 Helix-loop-helix DNA-binding

Identifiers

Type Value
idSolyc03g118310.2.ITAG2.4
pacid36136137
tidSolyc03g118310.2.1.ITAG2.4
tidSolyc03g118310.2.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010162
ISO
PLAZA Integrative Orthologyseed dormancy process AT3G26744
GO:0010440
ISO
PLAZA Integrative Orthologystomatal lineage progression AT3G26744
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT3G26744
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G12860
GO:0009960
ISO
PLAZA Integrative Orthologyendosperm development AT3G26744
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT3G26744
GO:0045892
ISO
PLAZA Integrative Orthologynegative regulation of transcription, DNA-templated AT3G26744
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G26744
GO:0050826
ISO
PLAZA Integrative Orthologyresponse to freezing AT3G26744
GO:0010115
ISO
PLAZA Integrative Orthologyregulation of abscisic acid biosynthetic process AT3G26744
GO:0010444
ISO
PLAZA Integrative Orthologyguard mother cell differentiation AT1G12860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0001046
ISO
PLAZA Integrative Orthologycore promoter sequence-specific DNA binding AT3G26744
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT3G26744
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G26744

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G26744

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638Helix-loop-helix DNA-binding domain superfamily

Mapman id Description
15.5.32RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)
26.4.3.4.1External stimuli response.temperature.cold response.ICE-CBF cold acclimation transcriptional cascade.transcription factor (ICE1|2)