Gene: Solyc03g031750.1 (Solanum lycopersicum)

Overview top

Gene Identifier
Solyc03g031750.1
Transcript Identifier
Solyc03g031750.1.1
Gene Type
Coding gene
Location
SL2.50ch03 : 4222264-4222893 : positive

Family Information

Homologous gene family
HOM04x5M005753
(54 genes in 35 species)
specific family
Orthologous gene family
ORTHO04x5M007082
(53 genes in 35 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
Vacuolar protein sorting-associated protein 28 family protein (AHRD V1 ***- D7MES4_ARALY); contains Interpro domain(s) IPR007143 Vacuolar protein sorting-associated, VPS28

Identifiers

Type Value
idSolyc03g031750.1.ITAG2.4
pacid36135202
tidSolyc03g031750.1.1.ITAG2.4
tidSolyc03g031750.1.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000813
IEA
InterProESCRT I complex
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G21560
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G21560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR038358VPS28, N-terminal domain superfamily
IPR037206VPS28, C-terminal domain superfamily
IPR007143Vacuolar protein sorting-associated Vps28
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminal
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminal
IPR037202ESCRT assembly domain

Mapman id Description
22.5.4.1.2Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.component VPS28