Gene: Sobic.003G394200 (Sorghum bicolor)

Overview top

Gene Identifier
Sobic.003G394200
Transcript Identifier
Sobic.003G394200.1
Gene Type
Coding gene
Location
Chr03 : 70502048-70510181 : negative

Family Information

Homologous gene family
HOM04x5M004483
(63 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M005884
(59 genes in 39 species)
specific family

Descriptions

Description
similar to Putative uncharacterized protein

Identifiers

Type Value
aliasSb03g043160
ancestorIdentifierSobic.003G394200.v2.1
ancestorIdentifierSobic.003G394200.1.v2.1
idSobic.003G394200.v3.1
pacid32731350
tidSobic.003G394200.1.v3.1
tidSobic.003G394200.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT1G50500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G50500
GO:0007009
ISO
PLAZA Integrative Orthologyplasma membrane organization AT1G50500
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G50500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G50500
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G50500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR039766Vacuolar protein sorting-associated protein 53
IPR007234Vps53-like, N-terminal

Mapman id Description
21.4.1.1.2Cell wall organisation.cell wall proteins.hydroxyproline-rich glycoprotein activities.arabinogalactan-protein (AGP) activities.lysine-rich AGP
22.6.1.3Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.component VPS53/HIT1