Gene: Pp3c20_3400 (Physcomitrium patens)

Overview top

Gene Identifier
Pp3c20_3400
Transcript Identifier
Pp3c20_3400V3.2
Gene Type
Coding gene
Location
Chr20 : 1782617-1786151 : negative

Family Information

Homologous gene family
HOM04x5M000508
(377 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001072
(179 genes in 39 species)
specific family
Duplication type
Block duplicate

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
aliasPp1s187_11V6
aliasPhypa_168734
aliasPhpat.020G016300
namePp3c20_3400V3.2
pacid32945663
tidPAC:32945663

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006012
IEA
InterProgalactose metabolic process
GO:0010053
ISO
PLAZA Integrative Orthologyroot epidermal cell differentiation AT1G64440
GO:0009969
ISO
PLAZA Integrative Orthologyxyloglucan biosynthetic process AT1G64440
GO:0010306
ISO
PLAZA Integrative Orthologyrhamnogalacturonan II biosynthetic process AT1G64440
GO:0046369
ISO
PLAZA Integrative Orthologygalactose biosynthetic process AT1G12780
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT1G63180
GO:0010246
ISO
PLAZA Integrative Orthologyrhamnogalacturonan I biosynthetic process AT1G64440
GO:0042546
ISO
PLAZA Integrative Orthologycell wall biogenesis AT4G23920
GO:0009832
ISO
PLAZA Integrative Orthologyplant-type cell wall biogenesis AT1G64440

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003978
IEA
InterProUDP-glucose 4-epimerase activity
GO:0050373
ISO
PLAZA Integrative OrthologyUDP-arabinose 4-epimerase activity AT1G12780

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G12780
GO:0005795
ISO
PLAZA Integrative OrthologyGolgi stack AT1G64440
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G12780

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005886UDP-glucose 4-epimerase
IPR016040NAD(P)-binding domain
IPR036291NAD(P)-binding domain superfamily

Mapman id Description
3.13.8Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucose 4-epimerase