Gene: Potri.005G044400 (Populus trichocarpa)

Overview top

Gene Identifier
Potri.005G044400
Transcript Identifier
Potri.005G044400.3
Gene Type
Coding gene
Location
Chr05 : 3272565-3274347 : negative

Family Information

Homologous gene family
HOM04x5M001175
(189 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M001169
(170 genes in 38 species)
specific family
Duplication type
Block duplicate

Descriptions

Description
similar to Cu/Zn superoxide dismutase. [ORG:Pisum sativum]; [ co-ortholog (1of2) of At1g08830, 1803526A, BAD51400, CAC33845, JW0084, CAE54085, AAA33659, CAA10160, ]

Identifiers

Type Value
aliaseugene3.00700152
aliasPt-CUZN-SOD.1
aliasPOPTR_0005s04590
idPotri.005G044400.v3.1
pacid37262740
tidPotri.005G044400.3.v3.1
tidPotri.005G044400.3

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006801
IEA
InterProsuperoxide metabolic process
GO:0055114
IEA
InterProoxidation-reduction process
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT1G08830
GO:0035195
ISO
PLAZA Integrative Orthologygene silencing by miRNA AT1G08830
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT1G08830
GO:0046688
ISO
PLAZA Integrative Orthologyresponse to copper ion AT1G08830
GO:0071280
ISO
PLAZA Integrative Orthologycellular response to copper ion AT1G08830
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G08830
GO:0071493
ISO
PLAZA Integrative Orthologycellular response to UV-B AT1G08830
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G08830
GO:0071472
ISO
PLAZA Integrative Orthologycellular response to salt stress AT1G08830
GO:0019430
ISO
PLAZA Integrative Orthologyremoval of superoxide radicals AT1G08830
GO:0071484
ISO
PLAZA Integrative Orthologycellular response to light intensity AT1G08830
GO:0010039
ISO
PLAZA Integrative Orthologyresponse to iron ion AT1G08830
GO:0071457
ISO
PLAZA Integrative Orthologycellular response to ozone AT1G08830
GO:0034599
ISO
PLAZA Integrative Orthologycellular response to oxidative stress AT1G08830
GO:0071329
ISO
PLAZA Integrative Orthologycellular response to sucrose stimulus AT1G08830

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
InterPrometal ion binding
GO:0004784
IEA
InterProsuperoxide dismutase activity
GO:0016209
ISO
PLAZA Integrative Orthologyantioxidant activity Solyc01g067740.2
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G08830

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08830
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G08830

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001424Superoxide dismutase, copper/zinc binding domain
IPR036423Superoxide dismutase-like, copper/zinc binding domain superfamily
IPR024134Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone
IPR018152Superoxide dismutase, copper/zinc, binding site

Mapman id Description
10.2.2.3Redox homeostasis.enzymatic reactive oxygen species scavengers.superoxide dismutase activities.copper/zinc superoxide dismutase