Gene: Oropetium_20150105_13133 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_13133
Transcript Identifier
Oropetium_20150105_13133A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_033 : 2133619-2141666 : negative

Family Information

Homologous gene family
HOM04x5M004483
(63 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M005884
(59 genes in 39 species)
specific family

Descriptions

Description
Similar to VPS53: Vacuolar protein sorting-associated protein 53 A (Arabidopsis thaliana)

Identifiers

Type Value
idOropetium_20150105_13133.v1.0
pacid35999836
tidOropetium_20150105_13133A.v1.0
tidOropetium_20150105_13133A

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT1G50500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G50500
GO:0007009
ISO
PLAZA Integrative Orthologyplasma membrane organization AT1G50500
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G50500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G50500
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G50500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR039766Vacuolar protein sorting-associated protein 53
IPR007234Vps53-like, N-terminal

Mapman id Description
22.6.1.3Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.component VPS53/HIT1