Gene: Oropetium_20150105_12722 (Oropetium thomaeum)

Overview top

Gene Identifier
Oropetium_20150105_12722
Transcript Identifier
Oropetium_20150105_12722A
Gene Type
Coding gene
Location
Oropetium_genomic_20141112_035 : 1998293-1998940 : positive

Family Information

Homologous gene family
HOM04x5M005753
(54 genes in 35 species)
specific family
Orthologous gene family
ORTHO04x5M007082
(53 genes in 35 species)
specific family

Descriptions

Description
Similar to VPS28-2: Vacuolar protein sorting-associated protein 28 homolog 2 (Arabidopsis thaliana)

Identifiers

Type Value
idOropetium_20150105_12722.v1.0
pacid35996844
tidOropetium_20150105_12722A.v1.0
tidOropetium_20150105_12722A

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G21560

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000813
IEA
InterProESCRT I complex
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT4G21560
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT4G21560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR038358VPS28, N-terminal domain superfamily
IPR037206VPS28, C-terminal domain superfamily
IPR007143Vacuolar protein sorting-associated Vps28
IPR017898Vacuolar protein sorting-associated, VPS28, N-terminal
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminal
IPR037202ESCRT assembly domain

Mapman id Description
22.5.4.1.2Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-I complex.component VPS28