Gene: LOC_Os12g03540 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os12g03540
Transcript Identifier
LOC_Os12g03540.1
Gene Type
Coding gene
Location
Chr12 : 1405506-1409257 : negative

Family Information

Homologous gene family
HOM04x5M004507
(63 genes in 38 species)
specific family
Orthologous gene family
ORTHO04x5M005410
(62 genes in 38 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

Descriptions

Description
WD domain, G-beta repeat domain containing protein, expressed

Identifiers

Type Value
idLOC_Os12g03540.MSUv7.0
pacid33154475
tidLOC_Os12g03540.1.MSUv7.0
tidLOC_Os12g03540.1
RAPOs12g0129400

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Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005635
ISO
PLAZA Integrative Orthologynuclear envelope AT3G56900
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT3G56900

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain superfamily
IPR001680WD40 repeat
IPR024977Anaphase-promoting complex subunit 4, WD40 domain
IPR017986WD40-repeat-containing domain
IPR036322WD40-repeat-containing domain superfamily

Mapman id Description
23.5.1.1.1.8Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).outer ring.scaffold nucleoporin (ALADIN)