Gene: LOC_Os01g67880 (Oryza sativa ssp. japonica)

Overview top

Gene Identifier
LOC_Os01g67880
Transcript Identifier
LOC_Os01g67880.1
Gene Type
Coding gene
Location
Chr1 : 39449917-39454179 : negative

Family Information

Homologous gene family
HOM04x5M004483
(63 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M005884
(59 genes in 39 species)
specific family

Descriptions

Description
vacuolar protein sorting-associated protein 53, putative, expressed

Identifiers

Type Value
idLOC_Os01g67880.MSUv7.0
pacid33123247
tidLOC_Os01g67880.1.MSUv7.0
tidLOC_Os01g67880.1
RAPOs01g0906200

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042147
IEA
InterProretrograde transport, endosome to Golgi
GO:0010286
ISO
PLAZA Integrative Orthologyheat acclimation AT1G50500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT1G50500
GO:0007009
ISO
PLAZA Integrative Orthologyplasma membrane organization AT1G50500
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT1G50500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G50500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000938
IEA
InterProGARP complex
GO:0005739
RCA
Gene Ontologymitochondrion
GO:0000139
ISO
PLAZA Integrative OrthologyGolgi membrane AT1G50500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR039766Vacuolar protein sorting-associated protein 53

Mapman id Description
22.6.1.3Vesicle trafficking.target membrane tethering.GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes.component VPS53/HIT1