Gene: LOC_Os01g05900 (Oryza sativa ssp. japonica)

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Gene Identifier
LOC_Os01g05900
Transcript Identifier
LOC_Os01g05900.1
Gene Type
Coding gene
Location
Chr1 : 2820235-2820696 : negative

Family Information

Homologous gene family
HOM04x5M000219
(678 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M000156
(620 genes in 39 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed

Identifiers

Type Value
idLOC_Os01g05900.MSUv7.0
pacid33125755
tidLOC_Os01g05900.1.MSUv7.0
tidLOC_Os01g05900.1
RAPOs01g0152300

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
RCA
Gene Ontologynucleosome assembly
GO:0051276
RCA
Gene Ontologychromosome organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046982
IEA
InterProprotein heterodimerization activity
GO:0003677
RCA
Gene OntologyDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G22880

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G45980
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G22880
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G07790
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G46030
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT3G45980
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G02570

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009072Histone-fold
IPR000558Histone H2B
IPR007125Histone H2A/H2B/H3

Mapman id Description
12.1.3Chromatin organisation.histones.histone (H2B)