Gene: GSVIVG01015002001 (Vitis vinifera)

Overview top

Gene Identifier
GSVIVG01015002001
Transcript Identifier
GSVIVT01015002001
Gene Type
Coding gene
Location
chr11 : 343151-347775 : positive

Family Information

Homologous gene family
HOM04x5M001278
(176 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001342
(156 genes in 39 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
idGSVIVG01015002001.Genoscope12X
pacid17825829
tidGSVIVT01015002001.Genoscope12X
tidGSVIVT01015002001

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
IEA
InterProDNA metabolic process
GO:0006281
IEA
InterProDNA repair
GO:0000724
IEA
InterProdouble-strand break repair via homologous recombination
GO:1990426
IEA
InterPromitotic recombination-dependent replication fork processing
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G20850
GO:0045003
ISO
PLAZA Integrative Orthologydouble-strand break repair via synthesis-dependent strand annealing AT5G20850
GO:0010332
ISO
PLAZA Integrative Orthologyresponse to gamma radiation AT5G20850
GO:0006302
ISO
PLAZA Integrative Orthologydouble-strand break repair AT5G20850

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005524
IEA
InterProATP binding
GO:0008094
IEA
InterProDNA-dependent ATPase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0000150
IEA
InterProrecombinase activity
GO:0003690
IEA
InterProdouble-stranded DNA binding
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20850

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G20850
GO:0005694
ISO
PLAZA Integrative Orthologychromosome AT5G20850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033925Rad51/DMC1/RadA
IPR013632DNA recombination and repair protein Rad51-like, C-terminal
IPR016467DNA recombination and repair protein, RecA-like
IPR020587DNA recombination and repair protein RecA, monomer-monomer interface
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domain
IPR003593AAA+ ATPase domain
IPR003583Helix-hairpin-helix DNA-binding motif, class 1
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical
IPR011941DNA recombination/repair protein Rad51

Mapman id Description
14.3.2.4DNA damage response.homologous recombination repair (HR).BRCC DNA-damage response complex.component RAD51