Gene: CALSI_Maker00027032 (Calamus simplicifolius)

Overview top

Gene Identifier
CALSI_Maker00027032
Transcript Identifier
CALSI_Maker00027032
Gene Type
Coding gene
Location
scaffold3 : 1100424-1102652 : positive

Family Information

Homologous gene family
HOM04x5M000034
(2497 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M000013
(2457 genes in 39 species)
specific family

Descriptions

No default description found ...
Description of best ortholog(s):

Identifiers

Type Value
tidMaker00027032

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0008360
ISO
PLAZA Integrative Orthologyregulation of cell shape AT5G23260
GO:0080060
ISO
PLAZA Integrative Orthologyintegument development AT5G23260
GO:0051302
ISO
PLAZA Integrative Orthologyregulation of cell division AT5G23260
GO:0010093
ISO
PLAZA Integrative Orthologyspecification of floral organ identity AT5G20240
GO:0045595
ISO
PLAZA Integrative Orthologyregulation of cell differentiation AT5G23260
GO:0080155
ISO
PLAZA Integrative Orthologyregulation of double fertilization forming a zygote and endosperm AT5G23260
GO:0048316
ISO
PLAZA Integrative Orthologyseed development AT5G23260
GO:2000029
ISO
PLAZA Integrative Orthologyregulation of proanthocyanidin biosynthetic process AT5G23260
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT5G23260

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IEA
InterProRNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G20240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G20240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR033896MADS MEF2-like
IPR036879Transcription factor, MADS-box superfamily
IPR002487Transcription factor, K-box
IPR002100Transcription factor, MADS-box

Mapman id Description
15.5.14RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)